| Tag | Content |
|---|
EnhancerAtlas ID | HS173-00148 |
Organism | Homo sapiens |
Tissue/cell | SH-SY5Y |
Coordinate | chr1:21633080-21636300 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:21636265-21636286 | TTTTTCTTTCTTTTTTTTTTT | + | 6.59 |
|
| | Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
| SE_00854 | chr1:21633214-21636405 | Adrenal_Gland | | SE_01643 | chr1:21634033-21636272 | Aorta | | SE_05710 | chr1:21634990-21636313 | Brain_Cingulate_Gyrus | | SE_05944 | chr1:21633077-21638154 | Brain_Hippocampus_Middle | | SE_08398 | chr1:21633501-21638178 | Brain_Inferior_Temporal_Lobe | | SE_12161 | chr1:21633335-21634139 | CD3 | | SE_15142 | chr1:21635160-21636148 | CD4_Memory_Primary_7pool | | SE_17692 | chr1:21633251-21634336 | CD4p_CD25-_CD45RAp_Naive | | SE_18622 | chr1:21634330-21635856 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_26127 | chr1:21635142-21636299 | Duodenum_Smooth_Muscle | | SE_26770 | chr1:21634339-21636405 | Esophagus | | SE_31433 | chr1:21634419-21636259 | Gastric | | SE_46660 | chr1:21634561-21635094 | Ovary | | SE_46660 | chr1:21635700-21636230 | Ovary | | SE_48583 | chr1:21634013-21636131 | Right_Atrium | | SE_54639 | chr1:21630709-21637916 | Stomach_Smooth_Muscle | | SE_56171 | chr1:21633655-21634878 | u87 | | SE_56171 | chr1:21635019-21636213 | u87 | | SE_65263 | chr1:21633994-21636234 | Pancreatic_islets | | SE_67931 | chr1:21633655-21634878 | u87 | | SE_67931 | chr1:21635019-21636213 | u87 | | SE_68932 | chr1:21633171-21636100 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 21633185 | 21633268 | | chr1 | 21634438 | 21634710 | | chr1 | 21635304 | 21636088 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I021306 | chr1 | 21633336 | 21634139 | | GH01I021307 | chr1 | 21634294 | 21636187 |
|
Enhancer Sequence | GGCCTCCCAA AGTGGGATTA CAGGCCTGAG CCACTGCACC CGGCCATATT ATTGACCCTA 60
TTTTGTAGGT GAGAAAGCTG AGGCACAGAA AGGTTACAGT CAAGATCATC CAGCTCTAAG 120
GCATTTGGGA TCTGAACCCA GGCAATATGA CTCCAACTTG ACCCTAACCA GTACAGTGAT 180
GGCCTCACTG CAGAGAGCGA TGAGTGTTAC AAAGACAGGG CAGCAGCGAG GTGTGCTCAA 240
GCCTCTGGGG AGGAGTCGAG GAAGGTCTCC ATGAGCCCTG TCTGACCAAC CCCCCCAATC 300
TACAGATGAA CTAACTGAGG CCCCCTGGAC ATGCTGAGTC AGGGACACAG TCAGGACTAG 360
AAGCCAGGCT TTTATACTCC CGGCCCAGTG CTCCTTCCAA AGCCCTGCAA CTGTGCCACA 420
AATGCTAAGG GCCTGGCAGC GAGGACTGAG CCAACTCTTG GGCTTAGGAT GACTGAGGTC 480
CACCGAGGAC TCCCTCGTCT CCCTGCACTC AAGACTCTCC CCTTCCTCTG GGTCCAGCAT 540
GGGTCTCAGC TCCCAGACTG CTCCCTGCTT AGAACTCCTG TCCACATTAC CCCAGCCCGG 600
GCCCTGTAAT GCTGGCTTTA ACATTTCCAA AGCGGGCTCG TTCCCTTTAA TTCACTTTTG 660
CTCTTCACAG CGACTCTGGG GGGCTGGAGC TAGCATCTCC ACATCATGGG TGGAAGATAG 720
ATCTCAAGGT CAGACACATT TGGCTGCTTA GCAGCTGTGT GATGTTGAGC GAGTCATGTC 780
ACCTCTCGGA GCCTCAATTT CCTCCCTCTG CATGGTGAGG GTGGCAGTGG CTTCCTTGCC 840
GGGGGTTATG AGCATCTAGT GAGACACCAC TAGAGTCTGT GTAAAGTGCC AAGCACAGTG 900
GCTGGCACAT ATTAAGTATT TCATAAAAAG CAAGTTTTAA ACATGATCAC TACAGTCATT 960
GATGTGAGGA CGTCAGCAGC AGAGGGGCCT CCAGAGGACA TTTTCTTGCA CCCCAGGAGG 1020
CATTCCTGTC ATTTGTCCCC ACTGGGTCTG GGGCTGGGGC TTCTTTGTAC CTCTGAGGTA 1080
CAAAGTGGAA GCTCTGCCTG GCTGGCAAGA CCAGACCTGT TGTGGCGGCC AGGCTGTACC 1140
CACGCAGGGC CACTGCTCCT AGGGCACTGG GCTCCAGACA GAAAATGGGA AGGGACAGAT 1200
AAGCCTCTAT GAAAGGTGGC CAGGCACAGG AAAGAGGCCC TGCCCCCTTG AGAGGGAGGC 1260
CCTGCCCCCT TGAGAGGTTG GCCCCGCCTT GAGCATCCTT GTCAGGCAGA GATCTGGGCA 1320
GGACAGAAGA GAGGAGGTGC CTGGCTCAGT TTTGCTGCGA TCCCAATGGG TCACACGCCT 1380
TCTGGATCCC CCCAGAAGGT CTAGAATGGG GTCACCCCTC AAAACCTCCC TGGCTCACTC 1440
TTAGCTTGGA ACCATGAACG AGCTTGCTCC CACCCACATG GAAAGCAGCT GCCCTTCCCC 1500
TGGAGACATT TTCCACTTCT CTACCTCCAG ACCTCTGCTC ATGCTGTTTC CTCCACCTGG 1560
TAAACCTCAC TCTCTGCTGT GCTGTCAGAA AATGGCCAAC CTTTTGAGTC TCAGCTGAAA 1620
TGGCACTCCC TTTGCCCCAG CTTTAGTTTA ACAAGCATTT GTGCATGCTC TGGAGATGGG 1680
CTGTCCTGCC CTCATACACC CTGCTAGGGC CTAGCCAATG AGGGACAACC GGAAGTCTTA 1740
CCCTCCAGCC CCCACCCCGG AGACCACCTG TGTAGGACCC CCAGGGGTTG CCAGGATCCT 1800
CCCCACAAAC GGCAAAGCAC TCTCTATTTG GGGGAACAGC CCTTCTCTGG AATTGGGAGT 1860
AACAAGAGGA AGGGAGGAAG GGCGTCTTGT GAGAGGGAGG GGCCAGGAGG CCTGAGGGAG 1920
CTCTGGCGTG TGTTCCAGAA ACCCTTTGGG ATCAGAGACA AGATCAAAGA GGCAGCCTTC 1980
ATGAGGCTGT CCAGGGCCCT GGACATGGAC CCAGGAAAAT TGGCTGGGTG ACCTCAAGCA 2040
AGTTACTTGC CCTTGCTGAG CCTCAACCTC CTCATTTGTG AAACAGGGCT AGTACCCCCA 2100
ACCTCTGAAT GAGACGGTGA ACAGCCTTTG TGCATGGGAG GGGCTTGAGT CTGGGTACTG 2160
AGGGGCGAGC TGGGGCCTGA GCGAATGCTG CAAGTCCCCC AGGGCTCCTT CTCTGATGCC 2220
GTGTCTCAGA GCCCCCTCCC CTTCCTGCCT GCCCAGGGTT TCCCTTGCTA GGAGCAGTTT 2280
TAAAACTCCC CAGTACCTGG GCTATGAGCC ACAGCTTCTT AAAGTTCCCC ATCTCCTGCA 2340
GCAGGCTTAG TTGGACTGAG CCAGAGCCCA TCATTCACTG TTTCTGGAGA TTATCACAGT 2400
TTGCAGAAAC AGCAGGGCAC CTAGCAGGAA TCTGGCACAG GCTCCTCGCT AGTTGGGACT 2460
GGAACTGGGC CAGGACAGCA CCTCGTGTCC TCTAAAAGGA TCCACAGGGC CTTCCCTCTC 2520
TCCTTTCCCC TCACTCAGGC ACACTGGGGT TCCAGAGTTC TAGGGCCACA TCCCAGACAC 2580
AGGCACTGCA GTCTTGTCCC CACTGGGATA TGAGACACAG AAAGAACCCT GGGCTGGAGT 2640
CAGGGGAGGA TGGTCACTCC CCCTCTGTGG TTAAGGACAG AAACTCTGGA GCCAGACTGC 2700
TGGCGTTCAA ACCCTGGCTC TGTCATTTAC CAACTGTGAC CTTGAGTGAG TTACTTAACC 2760
TCTCTGTGCC TCTGTCTTCT CACCTGTAAA GTGGTGAATC ACAGTACCCG TCCCACCAAG 2820
TTGTTGGGAG GATGCAGTTA GTTACCCAGA AAGTGTTTGG AGTAGTGCCT GGTATGCAGT 2880
GAGCGCTGGC TTGGTTGGGT GAATGAATGG GTGCATGAAG GAATGAGTCA ATGCGTCGGA 2940
GCTCTGCTCT GTGGCACGAG GCCCTTCAGG ATCTGCCCGG ACATCAGCAC CTGCCATTGT 3000
CCCAAGCAGG TCATGATCAC ATCCTTCCCA CCAGCTTCCT TGGCTTGGCA TAACCTCACC 3060
ATTGCTGTTA GTCCCAAGAA CTCCTTCAAC ACATGCTTCA AATGCCACCT CCTCTCTGAA 3120
GCCTCTTCAA TCAGGACCCT CAGGGCTGTT AATGATAAAA ACCAAACCCA GCTGGATTTT 3180
CTTTTTTTTT CTTTCTTTTT TTTTTTTTTT TTGAGACGTT 3220
|
