| Tag | Content |
|---|
EnhancerAtlas ID | HS172-05314 |
Organism | Homo sapiens |
Tissue/cell | SGBS_adipocyte |
Coordinate | chr19:18570080-18571420 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr19:18570799-18570810 | TTTTATGGCTC | - | 6.14 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_01013 | chr19:18570706-18572741 | Adrenal_Gland | | SE_06012 | chr19:18570472-18572983 | Brain_Hippocampus_Middle | | SE_23216 | chr19:18570560-18571677 | Colon_Crypt_1 | | SE_23893 | chr19:18569895-18570354 | Colon_Crypt_2 | | SE_23893 | chr19:18570591-18570836 | Colon_Crypt_2 | | SE_23893 | chr19:18570880-18571579 | Colon_Crypt_2 | | SE_26168 | chr19:18570408-18572157 | Duodenum_Smooth_Muscle | | SE_26932 | chr19:18570667-18573176 | Esophagus | | SE_31681 | chr19:18570731-18572664 | Gastric | | SE_41123 | chr19:18570485-18573111 | Left_Ventricle | | SE_41560 | chr19:18569881-18570405 | LNCaP | | SE_41560 | chr19:18570655-18573168 | LNCaP | | SE_42344 | chr19:18570637-18572709 | Lung | | SE_44495 | chr19:18570573-18572419 | NHDF-Ad | | SE_46271 | chr19:18569670-18572362 | Osteoblasts | | SE_47511 | chr19:18570846-18571845 | Pancreas | | SE_48120 | chr19:18566935-18573376 | Psoas_Muscle | | SE_48694 | chr19:18569737-18570446 | Right_Atrium | | SE_48694 | chr19:18570515-18572905 | Right_Atrium | | SE_50125 | chr19:18569695-18570438 | Sigmoid_Colon | | SE_50125 | chr19:18570516-18573140 | Sigmoid_Colon | | SE_51145 | chr19:18566712-18574014 | Skeletal_Muscle | | SE_52434 | chr19:18569863-18570520 | Small_Intestine | | SE_52434 | chr19:18570522-18572360 | Small_Intestine | | SE_53541 | chr19:18570544-18572320 | Spleen |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I018458 | chr19 | 18569759 | 18572635 |
|
Enhancer Sequence | TTCCCTACAA CCAGCCTGCC TTGCTGTTGC CGGTTGACCA AAGCTAAGTT CGTCTCCCAG 60
ACTGCTAACA AAGATGGATT CAGAACGTCT GCCTTAGAGG GATCTGAGGA AGCTCCAGGT 120
CACTGCCCTG AGTGGGTGCT GCGTGCTGGC CTACAGGGCA CTCTGGTCTC CATCTTGCTG 180
CAGGCATAGC AGTCACTGTT TTCTGCTGCA TCTGACATGG CTCTGCGTCA CAGCGTATCC 240
CATGGGGAGC ATTTTTTTTT TTTTTTTGAG ATGGAGTCTC GCTCAGTTGC CCAGGCTAGA 300
GTGCAATGGC GCTATCTTGG CTCACTGCAA GCTCCGCCTC CCGGGTTCAC GCCATTCTCC 360
AGCCTCAGCC TCTGGAGTAG CTGGGACTAC AGGCACCCGC CACCACGCCC GGCTAATTTT 420
TTTGTGTGTG TATTTTTAGT AGAGATGGGG TTTCACCATG TTAGCCAGGA TGGTCTCGAT 480
CTCCTGACCT CGTAATCCAC TTGCCTCGGC CTCCCAAAGT GCTGGGATTA CAGGCGTGAG 540
CCACCGCGCC CGGCCCATGG GGAGCATTTT TAACAGTTGA GTAATATCCC ACCCCCAAAC 600
TGCTGCCAGT TTCTCTGTAG CATAAACAGA CATTACTGTG TGCAGTTTTT TTCAGGTTGG 660
CAACAGTTTC CTTCGACGGG ATTCCCAGAA GCCAGATTAG TAGGTCAAAG GCTGAATATT 720
TTTATGGCTC ATGACAGGCT TTGCTAAATA TTACTCAGCC GTCAACACCC CTCCCCTTGA 780
AGGATAGGCT TGCGGGTTTC CCTGGGGCTC AGCCAGTCCT AGAGGTGGAC ACCTTCCATC 840
TCTGCTCTAG ATTTTTCCAC AGAGGGAGGG CCAAGCACCT TTGAGGCATG CAGTTTTGTC 900
ACTGCCATTC CTCAGCATGT CTGAGGGCCT GTGAGGGGCT GGAAATGACC AGTCTGGGTG 960
AGGCACATCC CCCTCCTCTT CTACAAGCCA ACAGTGTCCT GCTGACCCCC ACAGCTGCTT 1020
GGGGGGAAGC AGCTGCATAA TGAATATAGA AGCAAGAAGC AGACGAGCTG TCCAGGGGAA 1080
GTCACAGTGG CACAGGAAGG GACAATCTGC CTGCAGATGC TGGCCAGGCC TGCTCCCAGG 1140
AGGCACTGAA CCAAAGTCAC CTGGAGAAGC CAGGCACCAG CACAGACACC TCCTGGCCAG 1200
GCCAATGCAG GTCCCACATC TGATGACTCC ATCGAGCTCC CTTCAGCAAC TCCTGCTGGC 1260
ACCATGCCAG CCCTAGCCTT GGGAGCAGGA TGGGGGTGGA CGAGGGCCAG GCTGACATCC 1320
TCCCAAGGAA TGTGGAACAG 1340
|
