Tag | Content |
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EnhancerAtlas ID | HS170-02392 |
Organism | Homo sapiens |
Tissue/cell | RS4-11 |
Coordinate | chr20:34685920-34686860 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
SRF | MA0083.3 | chr20:34686585-34686601 | TTTCCAAATATGGTCA | - | 6.24 | SRF | MA0083.3 | chr20:34686585-34686601 | TTTCCAAATATGGTCA | + | 6.33 |
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| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_00373 | chr20:34679127-34694986 | Adipose_Nuclei | SE_23392 | chr20:34683856-34686896 | Colon_Crypt_1 | SE_23919 | chr20:34685414-34686889 | Colon_Crypt_2 | SE_24902 | chr20:34684062-34686901 | Colon_Crypt_3 | SE_27150 | chr20:34683929-34686940 | Esophagus | SE_31585 | chr20:34683178-34686914 | Gastric | SE_35139 | chr20:34683732-34687315 | HeLa | SE_47950 | chr20:34685670-34686488 | Pancreas | SE_50891 | chr20:34683206-34686995 | Sigmoid_Colon | SE_60277 | chr20:34680074-34731861 | Ly4 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I036095 | chr20 | 34683259 | 34687024 |
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Enhancer Sequence | GGTTGGTCTG GGAGGAAGGG AAGGACTGTT GACCTGGAGA CCTGGGCACA GAGGCTGCTA 60 AACAAGCTCA ATGGGAGGCC CCACTGGGGT GGATAGATAC CTAGAACAGG CTGTTCTAGG 120 AAGCTTTTTC CTCTGTAAGC CTGTCTTCAG CCTGGTTTCA CGACAGCCTG GCCCTGGAAG 180 GTGCAGGAGA GGTGAGAGTG ACTTCTCATG AGGAGCCTCT GGGTCCTCTT TAACCTCTAA 240 AGCTGCCTAA TGAGTGGGAA TCTGAAAAAC AGAGTTTGAG GGTCCTAGGT CTGCTACTCA 300 AAGGATGCAC AGTGTATTAA CTTCCTAGGG GTGCTGTCAT GAAGCACGCA AACCAGGTAG 360 CTTTGAACCA CAGACATTTA CTCCCCCACT TGTGGAGGCT AGAAGTCTGA AATCCAGGTG 420 TCAGCAAGGT TGGCTCCTTC TGGAGGCTCT GGGGCAATCT GTTTCCTGCC TTTCTCCTAG 480 CTTCTGGTGG TTGCCAGCAA TCTTTGGCAT TTCTTGGCTT GCAGCTGCAT CTGCCTCTGT 540 CGTCACGTGG CTTTCTCTCT GTTTCATTTC CTCTTCTAAG GACACCAGTC ATATGGGATT 600 TAGAACCCAC CCTAGTCCAG TATGACCTCA TTTGAACTTG AGTAATTGCA TCTGCAAAGA 660 CCCTGTTTCC AAATATGGTC ACATTATGAA GTTTTAGGTA GACATAAATT TGGGTTGGGA 720 GGGGACACTG TTCAACCCAA TACATGCAGG AAGTTGGGGA GGAGTGCATG CCTTTTAGTT 780 CCACAGGGCT ACATCCAAAT TTAGGCTTTG CAGTGGAGCC TCTATGAAAT GGAGACAGTA 840 GGCCAGGCAT GGTTGCTCAC GCCTGTAATC CCAGCACTTT GGGAGGCCGA GGTGGGCAGA 900 TCATCTGATC AGATTTGTAT TTCAAATTTG AGTGATCTGA 940
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