Tag | Content |
---|
EnhancerAtlas ID | HS170-02358 |
Organism | Homo sapiens |
Tissue/cell | RS4-11 |
Coordinate | chr20:20432190-20433960 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXP1 | MA0481.2 | chr20:20433860-20433872 | AAGTAAACAGAT | + | 6.74 | FOXP2 | MA0593.1 | chr20:20433860-20433871 | AAGTAAACAGA | + | 6.32 | Foxa2 | MA0047.2 | chr20:20433857-20433869 | GCTAAGTAAACA | - | 6.52 | IRF1 | MA0050.2 | chr20:20432768-20432789 | AAAAAGAAATTGAAAGTTAAA | - | 7 | Myod1 | MA0499.1 | chr20:20433221-20433234 | AGGAACAGCTGGT | - | 6.04 |
|
| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_33416 | chr20:20418723-20439254 | H2171 | SE_56327 | chr20:20431237-20433936 | u87 | SE_63383 | chr20:20416181-20450939 | NCI-H69 | SE_66867 | chr20:20418723-20439254 | H2171 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I020451 | chr20 | 20432541 | 20433844 |
|
Enhancer Sequence | GGTTGCAATT CCTGACTCTG AAATGTTTAA ATAAAATGTT CAGTAAAAGG TTATTTATAA 60 AAGAACCAAT ATTTTGATCA CTACTTCAAA GGGAGGCCTG ATTGTGTAAA TGCAAATAAC 120 TGCCTTATTT TAGTACTTAA GGTCTCAGAT TGAATGTAGC TATCTATTAG CACAACTGAT 180 CCAAAGTTTA GGAGGGACAT TCTTTTAGAA GATCCCATGT ATTTATTTTC TAGTTTGAAA 240 AATGGACATT TTAATATAAA TTTATAATCT AAATTTCTGT TGCCAGAATT TGGTTAAGTG 300 GGCCTTATTT AGTATACTAG AAGAGACTAT GCAAAATCAT ATTCCACAAA AGAATCAACA 360 TTCTCTTATA GCTTTAAAAT ACTATAATGT GAGCTTGAAA TGCTCCACAC CTGAATTGAT 420 AAGAGCATTA GGCAGTAGTT TCTATGAAGC TTTTAAAAGA GAAAGTTAAC TTCTACTAAA 480 CAATTACAAG TGTTCAACTA ATACAGTGTC TTCTGACCGA TTTTCTAATA ACAGCTTTTA 540 AAATAAATCT ACCAAACTGT TTTGACTCTT CCAATGTAAA AAAGAAATTG AAAGTTAAAG 600 CTTAAAAATT CCCCATATAG AGAGGAAATA AACTTAAAAT AGAAATTTAA AATAACTTCA 660 ATCCAAAGTA AAGCAAATCG TTTCATACAC TTTCAGTAAG TATAACAAAT TTTATATAGT 720 GACCCAAAAG TCACCATTGT AGAGCTTTGC AACTCAAGAC GTTTTAGCTG GAGGGGTTAA 780 AAGTGTGGGT GTGGAAGTCA GCTTTTGTTT GAAAAATTAG CAATGCTATG AGTCATCGTG 840 CATTAGCTGC AGAAGAGTTT TGCATCTTGT ACGAATCCAG ACACCATATG CCATGCGAAG 900 GCCTATTACT TTATTCGGTG CCACCGCTGA CAGGCAGCCA CGTGGGTATC CCCAGCGGAA 960 GGGCTGTCTC CTCCCGGCGG CGAGGACAGG AACCCAGTGA GCTGAACACA TCCGACATTG 1020 TACGGAGCAG CAGGAACAGC TGGTAAGCTA GCAAGCGGCA ACGGCCCAGC GAGGAGCGTG 1080 GATGCTAATG AGCCTGGCGA CAATGCCGGC CTTCAGAGGG GTAAGTGCAA TGTCGGCCGG 1140 CATGTTCCCA CAACAGCCTC AAGAGTAGAA TCTGCTCGTT CATGCCTTCA GTCTCATTAA 1200 AGCATGATAC TGGTATTTGT GGCTTATCAA AATCAGCTGT AAATCACAAG TTATAAATCC 1260 GACCAACAGA TCCAACATGA TTTAAAATGT TGCACTGAAA TGCAAGTAAA ATTCCACAGG 1320 CATCTTTGGG TCCTGATGGA GAGGTGTTGA CCAGGCACTG GGGTGGTGGG GAGCCGTGAG 1380 TTGATGGCAC AGGTGGAGCA GCTGCTGCTG GTTCAGGTCC TGGTTACCAT TCACAAAACT 1440 GTGTGGCCTC AGGCAAGTTA TTTAACTTTT CTGGGCTTCT GTTCCCTCAA CTATATTTTT 1500 TAAACATAAA AAAGTTTGTG ACATAATAGA TTGTGTTAAG ACATTGCATT GCGTTTGCAT 1560 AATACATTAA AATAGGATCA TAATTGTGCC TTCCTGATAG GATTGCTTAA TAACTGAATA 1620 AAATATGTGA GGTTCTTAGT GCCTGGGACA GAGCAAAGAA TGGTGCAGCT AAGTAAACAG 1680 ATGTCTCTCC AGGTGACCCA AGAGGACAGC TCCAAGCAGC TTCACCTCCT GGTCTTGTTC 1740 TTCTCACACA AGACAAGACA GTAGCACATC 1770
|