| Tag | Content |
|---|
EnhancerAtlas ID | HS170-00043 |
Organism | Homo sapiens |
Tissue/cell | RS4-11 |
Coordinate | chr1:19831630-19833180 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:19832048-19832069 | AAAGAGAAAGTGAAGCCAAAA | - | 6.39 | | RARA | MA0729.1 | chr1:19831721-19831739 | GAGGTGAAAAAGTCATGT | + | 6.64 | | RORA | MA0071.1 | chr1:19832254-19832264 | TGACCTTGAT | - | 6.02 | | Sox6 | MA0515.1 | chr1:19832065-19832075 | AAAACAATGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_00361 | chr1:19830861-19833107 | Adipose_Nuclei | | SE_25786 | chr1:19830679-19834334 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19831334-19833465 | Esophagus | | SE_29645 | chr1:19830730-19833010 | Fetal_Muscle | | SE_31447 | chr1:19831929-19832868 | Gastric | | SE_41031 | chr1:19830679-19834560 | Left_Ventricle | | SE_42185 | chr1:19830660-19833467 | Lung | | SE_48688 | chr1:19830682-19833436 | Right_Atrium | | SE_50058 | chr1:19831328-19834390 | Sigmoid_Colon | | SE_51211 | chr1:19830717-19833619 | Skeletal_Muscle | | SE_52345 | chr1:19831290-19834456 | Small_Intestine | | SE_53453 | chr1:19831280-19833158 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019504 | chr1 | 19830895 | 19834322 |
|
Enhancer Sequence | GGTTTTAACT GCTGGGGATG AGTCAGAAAG TGATGCTGGC TGAGTTGGAA CTGAGAACTG 60
TAATGCTTAT AAGAAATAAT AGAGAAGGTT TGAGGTGAAA AAGTCATGTT CCGAGGTACA 120
AAGGAAAAAC CAATAACAAC CCAGAGTTTG GAGTTTCATT CTGCCCTGCT CTGATAATAT 180
CACTATGGTG ATGTTCTCCA TAAACAATTG CAAAATAGCA AGATGAAAAG GAACAAGCAA 240
GTTCCACCCA GGCGATCTGG AGTTATTTTA GGGATCAAGG CAGTGTCATC TGGGGTAAAT 300
ATGGAATGCA AAATCTGTTC TTGTAATAAT CATCCCCTTC TTTTGTGAGG CTGAACAAAG 360
ACCTGGCAAA TCAGTCGTTT TGTGCTCAAA GAAGCACTGA CCCAGTGTTC TCAGGGCCAA 420
AGAGAAAGTG AAGCCAAAAC AATGGAAATG ATGGTTAATA ACAGATGCTG GAATTATTCT 480
TCTCACACCC ATGGACTCTG AGACTCCACT GAGCCTGGTG TGGAGTCCAA GCGGGTGGAA 540
CAACGGTGAT GTTCTTGGGT AGGGTTGGCC CAGTTGAGAG GCTGGGATCG GGACCCCAGG 600
TTGCTGAGCT CGGTTGCCTG CCCTTGACCT TGATTCTTGG GCCAGAGTCG GTGGAGGGAA 660
GCATCTTCAA GGCCACGGTC TGTCTCTGGG GCATCACCAT CTGCTGCAGA TGACATTTAC 720
TGCTCCTATC CTCATGCTAT TCTCTTTGAA CCCCTGACTC AGCGAGCCCC AGTCCAAAAA 780
GCAGAACTAG CTATTTTTTG CATCAAGAAA AAGATGTCAG GCAATACACT TGCCGAATTC 840
TTTGCTGACC CTGAAACGCT TCCTCTTTGC ACTTAACTCC TGTTCTTCCT TTATTCTCTT 900
TGCTGCCTTC TCTTCTAGAC CACTAAATTG CAAGCGCCGC TATCTTCTCC AATGAAGATG 960
CTCAAGGGAA GGGCTGTACT CAGCCATGGA GGCTGGCACA GTGCCTGGGG CACGCAAGTT 1020
TCTCCATAAA TGTCAGCTCA TAGGAGGTGA ATTCAAAATC CCATGCCTAC CCTAAAATGG 1080
ACATTTCTCC GGCAGATCTG AGACTGAGGC TATTTGTTCA TTCATTCAAC AAATATTTAT 1140
TGAGCACCTA CTAGAAACCA GAATTTGTGC TAGGGACTGG AGCTGTAAGG GAAACAAGAT 1200
TCCAGGGCCC TGTCCTTATG GAGATTACAT TCTTGTACAC TGTAATGCAA GTGGTGAGCA 1260
CAGCTTCCAT CTTGTCACAG TGGTGAGCAC AACCTACTTC TCTGACCATT GGACAAAAAA 1320
TTGCACTCCC CACTTACCTT GTCTTATTTT ATATTTCTTT GTTGCTGATC TTTCAGTCTT 1380
TGCATGCAAA AATGTATCCT CTTTGAGGGT GCTTTATGAT GTTCATTGCT GAATCCCAAG 1440
CACCTAGAAC CACTTCTAGC ATCCAGCAGG TGTGTTGGTC TATTTGGGCT GTTATAACAA 1500
ACTACCATGG ACTGAGCATT TTATAAACAG CAGAAATTTA CTTCTCACCG 1550
|
