| Tag | Content |
|---|
EnhancerAtlas ID | HS168-00142 |
Organism | Homo sapiens |
Tissue/cell | RPE |
Coordinate | chr1:43405040-43406330 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NKX2-3 | MA0672.1 | chr1:43405535-43405545 | ACCACTTGAA | + | 6.02 |
|
| | Number of super-enhancer constituents: 47 | ID | Coordinate | Tissue/cell |
| SE_01795 | chr1:43403674-43411142 | Aorta | | SE_02447 | chr1:43405569-43410613 | Astrocytes | | SE_06192 | chr1:43395065-43405505 | Brain_Hippocampus_Middle | | SE_07319 | chr1:43403966-43405365 | Brain_Hippocampus_Middle_150 | | SE_10377 | chr1:43396392-43405534 | CD19_Primary | | SE_11009 | chr1:43387831-43425728 | CD20 | | SE_12470 | chr1:43404286-43405407 | CD3 | | SE_14471 | chr1:43395753-43414527 | CD4_Memory_Primary_7pool | | SE_19657 | chr1:43396427-43405202 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20345 | chr1:43395492-43405550 | CD56 | | SE_20799 | chr1:43396312-43405729 | CD8_Memory_7pool | | SE_20799 | chr1:43405756-43409955 | CD8_Memory_7pool | | SE_22754 | chr1:43395674-43405513 | CD8_primiary | | SE_22754 | chr1:43406075-43412634 | CD8_primiary | | SE_23189 | chr1:43399749-43406265 | Colon_Crypt_1 | | SE_23904 | chr1:43401192-43405387 | Colon_Crypt_2 | | SE_25177 | chr1:43399941-43405213 | Colon_Crypt_3 | | SE_26580 | chr1:43395721-43413249 | Esophagus | | SE_29267 | chr1:43400819-43410293 | Fetal_Intestine_Large | | SE_31882 | chr1:43401274-43405435 | Gastric | | SE_33837 | chr1:43401475-43412846 | HCC1954 | | SE_34353 | chr1:43395339-43412997 | HCT-116 | | SE_35049 | chr1:43400682-43411164 | HeLa | | SE_36013 | chr1:43400628-43405505 | HMEC | | SE_36013 | chr1:43405529-43411011 | HMEC | | SE_37191 | chr1:43404622-43414101 | HSMMtube | | SE_38794 | chr1:43405440-43410875 | HUVEC | | SE_39883 | chr1:43397369-43405479 | K562 | | SE_39883 | chr1:43405665-43410931 | K562 | | SE_41038 | chr1:43405665-43414583 | Left_Ventricle | | SE_41620 | chr1:43403637-43405395 | LNCaP | | SE_42796 | chr1:43405575-43411121 | Lung | | SE_50202 | chr1:43396219-43406255 | Sigmoid_Colon | | SE_54088 | chr1:43400594-43405374 | Spleen | | SE_55821 | chr1:43399761-43405450 | u87 | | SE_55821 | chr1:43405505-43410178 | u87 | | SE_57045 | chr1:43396858-43405413 | VACO_400 | | SE_57045 | chr1:43405486-43406260 | VACO_400 | | SE_57417 | chr1:43405825-43410963 | VACO_503 | | SE_58561 | chr1:43388242-43430420 | Ly1 | | SE_60624 | chr1:43388552-43428820 | DHL6 | | SE_62392 | chr1:43388423-43425814 | Tonsil | | SE_64094 | chr1:43405747-43410036 | HSMM | | SE_64340 | chr1:43397259-43405516 | NHEK | | SE_64340 | chr1:43405657-43411071 | NHEK | | SE_67781 | chr1:43399761-43405450 | u87 | | SE_67781 | chr1:43405505-43410178 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I042929 | chr1 | 43395541 | 43414526 |
|
Enhancer Sequence | CGCTAGATTT CAGCGTTCTC AGTTCTGGCC ACTCACATCT CCAGCTTCGG TCTGCTGGGG 60
CTGGTTCCTG AAGTGACCTT TGGACAGGTG ACCATACATG GTCCTATGAA TGCAGTTTAC 120
AGGCTCATCT GGGCCCTCTG TGCTGCTGAC CAGCCCCGTG ATGCCCTGGT CAGAGGTTCT 180
GCCCATATTC CATGACAGTT ATAACCTCTT GCCTATTTCT GATTAGATGG GAGGCCCCGG 240
GGATCACAGA AGTTCATCTC AGATTTGTCT ACATCTTCAG AAGTCTCTCA GTCCCTGGCT 300
GGGCATGGTG GCTCATACCT GTAATCCCAG CACTTTGGGA GGCCAAGGCA GGTGGATCGC 360
CTGAGGTCAG GAGTTTGAGA CCAGCCTCAC CAACCTGGTG AAACCCCATC TCTACTAAAA 420
ACACAAAAAT TAGCTGGGCG TGGTGGTACA CACCTGTACC AGTAGCCCAG CTACTTGGAA 480
AGCTGAGGCA CGAGAACCAC TTGAACCCAG GAAGCGGAGG TTGCAGTGAG CCAAGATCAT 540
GCCACTGTAC TCTGGCCTGG GCAGCAGAGC AAGACTCCGT CTCAAAAAAA AAAAAAAAAA 600
AAAAGGTATC TCAGTCCCTC CTGGCCAAAG GCAGCCCCTC CCTTCTGCTC CGACACCACC 660
CTCCCTCCTG GAAGACCTCC GCCCTCACTT CCTTATCTTC ACCCTCTCCT GCTGATTCCT 720
TCCAACATGT TTAAAAATAA CCTTCATTAA AATAAATAAA TAAATTCCTA GCCATACCAT 780
CATTCCAAAC CTCCTCTTTT CTCCCTCTCC CACCAACTCT TTTGGAAGAG CCGTCTCCAC 840
CCTTTCTCAT CTGCCTCTCA CTCTTCACCC AATCGTAGTG AGGCTTCTAT CCACGCTGTG 900
CCACCCAGTC AGCCCGAGTG GCCACAAGGC CACCATCGCC TCTTCTGCAT TCAGCAATGT 960
GGAGAGGCTT GCCCAGTTCA ACCCCTGGGG TACCCGATGG CCTTCCTCCA CTCACTATCC 1020
ACCAGTGTCT ATTACTATGA CAGGCACCGT TCTAGGCACT AAGGACACGG CCGTGGACAA 1080
ACCAGACAAA TACCCTGGCC CTTCGATGGC TTACATTATC CCTCTGTCTT GGGAGGGTAT 1140
CCTCTCCTGG TTTTAGAGAT ACCAGCTCTT GTTCTTCTAC TTAGGGTCTT TTTCTAGCAA 1200
TGGGTTGTTC TCTGGGGCCT TGATCTTTTA CTTTTAATTT TTATTTATTT AATTATAAAA 1260
TTGAGATGAG GTCTTGATGT GTTGCTCAGG 1290
|
