| Tag | Content |
|---|
EnhancerAtlas ID | HS168-00053 |
Organism | Homo sapiens |
Tissue/cell | RPE |
Coordinate | chr1:12616150-12617440 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NKX2-3 | MA0672.1 | chr1:12616833-12616843 | TTCAAGTGGT | - | 6.02 | | RREB1 | MA0073.1 | chr1:12616473-12616493 | CACCCACCCAACCCCTCCAA | + | 6.07 | | RREB1 | MA0073.1 | chr1:12616469-12616489 | ACCCCACCCACCCAACCCCT | + | 6.7 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_00009 | chr1:12614857-12619344 | Adipose_Nuclei | | SE_01632 | chr1:12611630-12618044 | Aorta | | SE_26610 | chr1:12616140-12618035 | Esophagus | | SE_33994 | chr1:12616140-12617367 | HCC1954 | | SE_37524 | chr1:12615400-12618765 | HSMMtube | | SE_40699 | chr1:12616105-12617489 | Left_Ventricle | | SE_42271 | chr1:12616053-12617397 | Lung | | SE_47179 | chr1:12615224-12618859 | Panc1 | | SE_51223 | chr1:12615725-12618264 | Skeletal_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I012555 | chr1 | 12615632 | 12618061 |
|
Enhancer Sequence | ACACATGCAT TAATTTATGG CATGTATTAC TCCCTTGATT TTTACAAGCA ACTTTATGGA 60
GGACAGGGTT ATTAGTCCCA TCCTATAGAT GAAGAAACTG AGGCTCACAG AGGTTAAGTT 120
AAGGTGAAGG TGAAGCTCCA GGTCCCACAG AGCCAGGATT CGGAATCTCA GCCAGTCATG 180
GCTGGCTCCA AACTCCAGTC TCTTCCCTTC TCCGCAAGCT CCATGGCTCC CAGATAGGCT 240
GGCCAAGTCG GTTTGCAGCC AGTGTGGACA GCAAAGGAGA TTGGCCTGGC ATGGCTGAGA 300
AGGGTGGTCT AGGGCCAGAA CCCCACCCAC CCAACCCCTC CAAGAAGCCC ATTGCCTGAG 360
GAATCCACCG TGGCATCTGG GGGATGTTTA GCCTTCTCTC GTGCCCACAG CCAGGCCCCA 420
GGCTGGGGCT CTGCCCACAG TCCCCTTGTG ACCTTCCCAA GCAGGATCCA GTTACATCAC 480
AGCAGCAGCT CGAAGGAACA AACACAGCTT GTGTCTGCTT CCAACGGCTT ATTTCTCTTG 540
TCTTGTGAAT ACTGAGAAAT GAAAGGAATG ATAAGGATTT GTGGGCTGGA GGGGGGAAGG 600
CAGCCTGGAA AATTCTGCAG TGCTGGCGGA ACTCACCAAG AGGGTGGAGT GAAGTTTTCA 660
AACCAGCTCC AAAGAGGGAG AGATTCAAGT GGTTACATGG AAGGCCCAAG AGGTTTCCTG 720
GCTCCCCCTT GGCAGGTTAA GGGCCCAGCC CTGGGGCAGA TGGTTCCCCT CCCGGTTCTG 780
CTGCGGGCCT CTCTGTGGTC AGGACCCGGA AGCTCTCTGG GCCTCAGTTT CTTCAGCTAC 840
TCAGTGCCAA TAATGCCAGC TCCCACTGCT CCGGGTTAAG AAGAAGAAAT GAGAAAATGT 900
GTGTAGACCA GGGGTTCCTG ACAGGGGATG ATTTAACTCC TTCAGGCAGG GGTCCCTAAG 960
GTATTGGTCC ATGGCCTGTT AGGAAATGGG CCGCACAGCA GGAGGTGAGC GGAAGGCAAA 1020
TGAGCGAAGC TTCCTCTGTA TTTACAGCCG CTCGCCATCG CTTGCATTGC CGCCTGAGCT 1080
CCGCCTCCTG TCAGATCAGC CGCAGCATTA GATTCTCACT GGAGCTTGAA CCCTCTTGTG 1140
AACGGTGCAT GAGAGGGATC TAGGTTGCAT GCTCCTTATG AGAATCTAAT GCCTGATGAT 1200
CTGTGTCTCC CATCAGCCCC AGATGAGACC ATCTAGTTAC AGGAAAACAA GCTCAGGGTT 1260
CCCTCTGATT CTACATTATG GTGAGTTGTA 1290
|
