| Tag | Content |
|---|
EnhancerAtlas ID | HS167-05100 |
Organism | Homo sapiens |
Tissue/cell | Retina |
Coordinate | chr5:87967760-87968780 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr5:87968440-87968460 | CCCCCAAACACACCACCACC | + | 7.05 | | RUNX3 | MA0684.1 | chr5:87968080-87968090 | AAACCGCAAA | + | 6.02 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_02696 | chr5:87967312-87969712 | Astrocytes | | SE_03210 | chr5:87967209-87970118 | Brain_Angular_Gyrus | | SE_03976 | chr5:87958293-87982935 | Brain_Anterior_Caudate | | SE_04950 | chr5:87958444-87989956 | Brain_Cingulate_Gyrus | | SE_06110 | chr5:87966801-87978136 | Brain_Hippocampus_Middle | | SE_06732 | chr5:87958173-87991815 | Brain_Hippocampus_Middle_150 | | SE_07796 | chr5:87958266-87992522 | Brain_Inferior_Temporal_Lobe | | SE_08802 | chr5:87967823-87968438 | Brain_Mid_Frontal_Lobe | | SE_08802 | chr5:87968540-87968664 | Brain_Mid_Frontal_Lobe | | SE_56053 | chr5:87966727-87973473 | u87 | | SE_60284 | chr5:87954647-87973608 | Ly4 | | SE_61643 | chr5:87954482-87973550 | Toledo | | SE_63353 | chr5:87950865-87989017 | NCI-H69 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I088671 | chr5 | 87967249 | 87974250 |
|
Enhancer Sequence | AGAGGTGGAC ACCAAGAAAG GGAGGAAACG GAACCCGACT CTGCGGTGCT GGGCCCAAGG 60
CAGCCACAGC TCCAAAGGGG CCCCCGGCCG TGGCCGTGAC TTGACAGAGC CTCCGGTCTA 120
ACTTCTGATC AATTCCACTG CTCTCCTGAC CCCTCAAGAC AGTCCCCCAT TCAAGCACCG 180
CGGGTACATT TGCAAGATAA AACGCCGCAG ACACTAATGC AAATACATTG CCCGAGTTCC 240
CATCACCCTG GGTTCCTGCA GATAATTCCA GGCCACAGAA AGGAGTTCTT GCCTTCCTCA 300
GCCGGGTCTA GACTCTAAGC AAACCGCAAA GACCTAGCTC CGTTTGGATA CCAGAAGCGT 360
CTTAAGCTGA ACCGCTCCAA GTACCAATAA CTAACCATGA TGGTTGCATC TTGATGAATC 420
TGAACTTGGG ATAACCCTGT AAAGCGGCCT CTCACCTCCC AAAATTCAAA AGGCAAAGAG 480
AAAAGGGAAG TGGAAAGCCA CCAGATCTAC TTAGCTACTG TACTAAGTTT TCCACCAAAA 540
TCTAATCAGA CCCTCGCTTC CTTGCCAGGT AATTGCAACT TTGGGGCGGT TAAAGGGAGG 600
CGAATTCTTC AAAATGCGAA TTCGAATACA GAAGTGCAAA ATACAAGTGC ATTTTGCTCT 660
AGGTTTAAAA GGGAAAAGCC CCCCCAAACA CACCACCACC ACCACCACCA CAAAATTACA 720
TACAAAAATT CCCTTTTCCA ACGCGAAGAT TTCCTGGCAT CTCTCTGCGA TTGGGGGTCA 780
AGCCGCTGGA TAATTAACAG TACTGGCTAA GAAAACTCAC GAGATCAACA GGTTTAACAT 840
CCGAGGCACA CAATCAATTA GCTGAAGCAA AGCCCCGGAC TGGCCCTCGG AGCGGCCCGC 900
AGCGGGACTC TGCGGGCACC GGCTAGCGGG CGAGGTGAGG AGTGCGGGCG CGGGGCCGCG 960
GCGGGCACTG CTGGCCTCGC GCCGCGGGCG AGCTGCAGCC TGAGGGCCGC CACGATACTC 1020
|
