EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS167-04300 
Organism
Homo sapiens 
Tissue/cell
Retina 
Coordinate
chr3:187460920-187463190 
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr3:187462810-187462828CCCTCCTTCCTCTCCTCC-6.26
RREB1MA0073.1chr3:187461251-187461271CCCCCAAACCCCAGCCACCA+6.02
ZNF263MA0528.1chr3:187462531-187462552AGGGGAAGGGAAGGAAGAAGA+6.07
ZNF263MA0528.1chr3:187462540-187462561GAAGGAAGAAGAGGCGAGGAA+6.11
ZNF263MA0528.1chr3:187462816-187462837TTCCTCTCCTCCACCTCCTTT-6.28
ZNF263MA0528.1chr3:187462813-187462834TCCTTCCTCTCCTCCACCTCC-7.27
ZNF263MA0528.1chr3:187462807-187462828TTCCCCTCCTTCCTCTCCTCC-7.76
ZNF263MA0528.1chr3:187462810-187462831CCCTCCTTCCTCTCCTCCACC-8.11
Number of super-enhancer constituents: 56             
IDCoordinateTissue/cell
SE_00148chr3:187447683-187468463Adipose_Nuclei
SE_01006chr3:187460148-187463956Adrenal_Gland
SE_02707chr3:187461258-187464590Astrocytes
SE_03037chr3:187461116-187463228Bladder
SE_04435chr3:187461226-187468127Brain_Anterior_Caudate
SE_06535chr3:187453154-187466944Brain_Hippocampus_Middle
SE_07178chr3:187453399-187467079Brain_Hippocampus_Middle_150
SE_08746chr3:187461116-187464392Brain_Inferior_Temporal_Lobe
SE_09900chr3:187452783-187464451CD14
SE_12231chr3:187455925-187464692CD3
SE_14725chr3:187455285-187466264CD4_Memory_Primary_7pool
SE_15484chr3:187455350-187464710CD4_Memory_Primary_8pool
SE_16119chr3:187460965-187464670CD4_Naive_Primary_7pool
SE_16498chr3:187455187-187464438CD4_Naive_Primary_8pool
SE_18488chr3:187454912-187466364CD4p_CD25-_Il17-_PMAstim_Th
SE_19291chr3:187454421-187465931CD4p_CD25-_Il17p_PMAstim_Th17
SE_20460chr3:187455533-187465375CD56
SE_21072chr3:187455112-187465985CD8_Memory_7pool
SE_21782chr3:187460844-187464680CD8_Naive_7pool
SE_22047chr3:187455473-187464844CD8_Naive_8pool
SE_22898chr3:187455037-187465666CD8_primiary
SE_25563chr3:187455037-187469121DND41
SE_25921chr3:187453019-187466021Duodenum_Smooth_Muscle
SE_26745chr3:187453613-187465247Esophagus
SE_27918chr3:187455472-187465871Fetal_Intestine
SE_28834chr3:187455533-187465842Fetal_Intestine_Large
SE_29617chr3:187454437-187466094Fetal_Muscle
SE_31797chr3:187454355-187464198Gastric
SE_36447chr3:187453456-187466194HMEC
SE_37237chr3:187451885-187465853HSMMtube
SE_38785chr3:187461210-187464477HUVEC
SE_39216chr3:187461063-187464165IMR90
SE_40814chr3:187452992-187469049Left_Ventricle
SE_42273chr3:187453008-187467499Lung
SE_44601chr3:187453612-187465927NHDF-Ad
SE_44925chr3:187454897-187465351NHLF
SE_46137chr3:187452056-187465697Osteoblasts
SE_46888chr3:187461076-187462916Ovary
SE_47759chr3:187460602-187464108Pancreas
SE_48101chr3:187452105-187469150Psoas_Muscle
SE_48720chr3:187453613-187465715Right_Atrium
SE_49592chr3:187461029-187463563Right_Ventricle
SE_50524chr3:187453558-187464954Sigmoid_Colon
SE_51096chr3:187451648-187469428Skeletal_Muscle
SE_52314chr3:187461097-187464406Skeletal_Muscle_Myoblast
SE_52655chr3:187454295-187464401Small_Intestine
SE_53435chr3:187453660-187465339Spleen
SE_54666chr3:187452757-187469396Stomach_Smooth_Muscle
SE_55615chr3:187460832-187464221Thymus
SE_58415chr3:187448462-187470109Ly1
SE_59784chr3:187448299-187470544Ly4
SE_60517chr3:187454698-187469344DHL6
SE_62436chr3:187453300-187469211Tonsil
SE_63945chr3:187453542-187465483HSMM
SE_65150chr3:187461247-187465129NHEK
SE_65531chr3:187460474-187464393Pancreatic_islets
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr3187462185187463177
Enhancer Sequence
TTTCTAAACA GCCCTTTCCC TGGTTCCCTC TCTCCTGCCC CACTTTTTTT AAAATCCAGA 60
CTGTAAAAAA CACATCTACT GACACTCACT TTACTTTAAA AAAAGAAGAG AAAAAGTAAA 120
GCGTTACAAG ACTTTCCTCC TGGAAACTAT AAACTGAAAA AAAAATCCAT AAAAGATTAA 180
ATCCTGGCGG GTTGTGGGGT GGCGGGGGCC GGCGGGGAGG GGGCGCGGAG TGGAGATTGG 240
CTCTCTGAGG TGGTCAGGGG CCCTGTGACA GCTTGGGACT TTCAGCACCT GGTTTGGGGT 300
CATTTATCTG CTCAACTGTC AGGACCCCCC ACCCCCAAAC CCCAGCCACC AACACAACCA 360
TCGTAGAAGG GAACACAACA CAGAGGGTCT TTTTTCATTT TTTTAAAAAA TCGGTTTGGT 420
TGTGTTTTTG TTTTCCATGG GGGAGCTTTA AAACTCATTA TTGCAACACT AGTTCCATTT 480
TTCGCCAGGG TTCCAATAAC ACGGCATCAT AAAGGCAACG CAACCCACAG TTCTCAAGAC 540
ATTTACCACG GTCACTACAT CCGGCAGCGG GGTGGCCCCT AGCTCCTGCT GCCCCCCCGC 600
CCTTTCTCCC CGCCCGCCCC CGGAGCTCAG CCGATTTCTG AGGCTCCAAC TCTACCCACT 660
CCCTCCCCGG GCCGCCGCCG CCGCGCCTTC CCCCATTCTT ACTCCCTCGA GGAGAGCCAC 720
AGGTTGCAAA TCCAACCAAC CTCGCAATCT ATTTTTGCAA AATCACTCAC AAAGATCTCC 780
CTTTCGCGCC CGCGCCCGCT CCTCCCGCGC CGGGTCCCCT CAGCCACGGC CACAAAGTGC 840
CCTTCTCTCC TCCTGAGTCT TGCACATAAG GAACGCGGGC TGGGGCTCTG TTCGTCTTTC 900
TCCTCGCCCA AGGTAAGGAC CTCGGGAATC TGAAGCCTGG CGTCCACTAC GCTCAGGCCC 960
GCAGTTCCCT TTTTACAGAG CTTGCACCAT GGGAAAAAAT AAAATAAAAT TTAGGAAAGG 1020
GAGGCAACAG CCATTGGGAG CCAACACAGA GTCACGCAGC GCCCAAAATA CAAACACCGC 1080
AGCGGCCAGA AATCCCGCCA CCTTTCTCGT TCTCCCAGGC TGTCCTGTCG AGGTTCCCTG 1140
AGTCCCCCCG CACACTGAAA GGCATCGCAG GTGCAGTGCG CACCCCTTTC CCACCCACCC 1200
CAAGAAGCCC TGTCCCGCCA TCAGTCTCTC TCCTCGGGAT GAGCAGGGAG AGCGCGCGGA 1260
GGTTCCCGAC TCCCTCGACT ACAACCAAGA AAGAATAATT TTCAAAGTGT TCAACATCCC 1320
CGCCCCCAAG CTCCCCAAAA CACAGGGGCA GGGAACACCA AAACACTCGG CTCTCATTAG 1380
GAAGATCACG GCTCTGAAAG GAAATAGTAG ACACGATACT TCATCTCATC TGGATTTATG 1440
ACCAAAAAAA CAAAAACAAA AACCCAAAGA GTTCGCTTGC ATTTTTTCCT TCCAAATCTC 1500
GGTTCGGCTC GAAGGCAGGG AATCTAAAAG ACCGAGGCCG ATGGAAGAGA GCCAGCGGGG 1560
CGAGCGAGCG GGCAGCCTCC CTTTTTGCCT CCCGGAGTTA CCCAGAAGGA CAGGGGAAGG 1620
GAAGGAAGAA GAGGCGAGGA AAAAGAGGAG GGAGGGAAGC GGAGGCCAGG AGCGACGGAG 1680
CAAGGAAAGC AGTTTGCAAG CGAGAAAAGA GGGAAAAAAC ACAGCCGCAC GAATCCAGAG 1740
AGATCACAAG CCGTACGCAA GCAGCAGCAG AAAGAGCGAG AGCGCGAGCG CGCGTCCTCT 1800
CCGCGGTCTG GGGCCAGACA GCCCCCAGAC TAGCCCGAAT CACCCCCCAA GCACTGTCTC 1860
GTCCTCTCTG CTCCGGCCGC CCCCTAATTC CCCTCCTTCC TCTCCTCCAC CTCCTTTCCA 1920
AAAACCAAAA CAACACAAGG GAGGGTGGCA AAAGCCTCCC CAAACCGGCC GATTCACTCA 1980
AAGACAACAA TAATAATAAT AAATACATAA CAATCTATAT CCTATGGTGG GAGAGACGTG 2040
GGACTAATCT TCGGCATTTA TTTTAACACC TGACAGCTAG AATAAATAAA TATATACATT 2100
TATATCAATA GATACACATA GAAAACTTGG AGCCAAAGCA TTTGGCAAGA GCGGAAAAAA 2160
AAAGAATTAA AAGGTAAAAT AATGATCATG AGCAGCGGCG GCGGCAGCGG CACCAGCGGC 2220
AACAGCGGCG GCGGCGGCAG TAGCAGCAGC AGCGGCGGCA GCAACAGCAA 2270