EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS167-04212

Organism

Homo sapiens

Tissue/cell

Retina

Coordinate

chr3:155380460-155383490

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr3:155380847-155380859	AAATAAACAATC	-	6.62
Foxq1	MA0040.1	chr3:155382171-155382182	AATAAACAATA	-	6.62
Klf1	MA0493.1	chr3:155382792-155382803	TGGGTGTGGCC	-	6.62
Lhx3	MA0135.1	chr3:155382636-155382649	AATAAATTAATTT	-	6
NFYB	MA0502.1	chr3:155381587-155381602	CTGATTGGCTGATAT	-	6.82
Nkx2-5(var.2)	MA0503.1	chr3:155383009-155383020	AGCCACTCAAG	+	6.62
Nr2f6(var.2)	MA0728.1	chr3:155380671-155380686	TGAACTCCTGACCTC	-	6.22
POU2F2	MA0507.1	chr3:155382502-155382515	TGCATTTGCATAA	+	6.29
Pou2f3	MA0627.1	chr3:155382501-155382517	TTGCATTTGCATAACA	-	6.44

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I155663

chr3

155381101

155385403

Enhancer Sequence

TTTTGTTTTT TTAGATGGAG TCTCACTCTG TCGTCCTGAC TGGAGTGCAG TGGCGCAATC 60
TCAGCTCACT GCAACCTCCA CCTCCCAGGT TCAAGTGATT CTCATCCCTC AGCCTCCAAG 120
TAGCTGGGAT TACAGGCGAC AACCACCACG CCCGGCTACT TTTTGTATTT TTAGTAGAGA 180
TGGGGTTTCG CCATGTTGGC CAGGCTGGTC TTGAACTCCT GACCTCAGGT AATCCGCCCA 240
CCTTGGCCTC CCAAAATTCT GGGATTACAG ACTGGAGCCA CCACTCCCAG TTCAGGTTTA 300
TGTATTTCTT ACCTTTCTTC TTTTTTGGCT ATAATTTAAA AAAGTATTAA ATCTTTTCTT 360
CTGATTGAAA AATCTCCAAT GTTTTATAAA TAAACAATCA TGGTGTGCCA GCTCCATCGT 420
AGGACACTAG TGCAGATTAT AAGGATGCCA AGTGGAATGA GACACTGTCC CTGTTATGTA 480
AATCTCCTAG GAGAAACACA CTCTGATATT TTCAATAGTT AAATTCTAGA AAGGTTTTCT 540
GGCTAAGTTC ATATCTTGTG TTTTCTACAT CCTCTTAAAA TCTTACTATT TAAAATATAA 600
AGACAAAAGA GCAATCTACA AAAATCTATG TATATCTCTT TTGTAACCTG TGATTTAATC 660
AATTTAGACA ACTGCCTTTG GTTAGATTTG GGTAACTAAG AATATGCATG GAGAAGCAAA 720
TCCTGACCTA ATTCTATCAC TAACTAACTG CTGAAACCTT TTGCTCTCTT TCCGCTTTTG 780
CTCCTTTCTC CCACTTTCCA TAAGCCAGTC AAAGTATTCA AGCTCCACAT TATTCTAGCT 840
GTAGAGACTT CTGCTCCAGA TATTAATGTC TATAAAAATA TTATCTCCCA GCAAAACCTT 900
CCCTGTCTCT CAAAAGTAGG AAACATTTAC CCATTCCTTT TGTATCTTCT CCCACTTAGT 960
TGTGTGTGCC TCACGCAGGG GCTATGGCTT ATTTACCCAG CTATCCTTTG CACACAGTAT 1020
AATGCAAGAT GCATAACAGC TACTAAGCAG TCAATAAACA TTAGCTCCAT GAACTTCCCC 1080
TCCAACATTT AGCTTAATAT CTCTACATGC TAAATGCTGA ATTTGTACTG ATTGGCTGAT 1140
ATAAACTCTT AATTTGCCAA TCATTAGAGG AAAAGCATTA CTATCAAGTT TGCACCACTA 1200
TTGTTTAGGC TATTATGTCT TCAAACTATT ATAGCAAAAT TCAGGCTATG CAACAAGCAG 1260
AAGCAAACAT TAATGAGACA GTGCACTTGT GATACCAAAG CATTCCTCAG CCAACTGTCT 1320
TTTACTCTGC CTTTTACTCC CTGCTATAAT CATTCAGTTA ATATTTGCTA ACCGATGAGT 1380
TGAATAGTGA TGCATCATAA ACAGTCTGAT GACAGTACCA ATTATAAAGA CAAGAAAGGA 1440
CCATGTGTTT ATGTTCAGAA AAGAAACTGG CAAAGGCAGC ATAGTAGAGG GGATTCAGCT 1500
GGGACTGAAC TCAGGGTGCC TGATTATCTT GGCTAGTTCG CTATTCCACA AGTGTAAAGA 1560
AACCTATGGT GCTCATCCAC CCTAGTGGAA AAGCATCTTT CCTACTGAAA TTACCTTCCA 1620
GCTGCATAAT GTCTGAACTA TAGGGCTCTA AAAAGAGATT TCAACCCTTC GGTCAAGACT 1680
CCCTGAGCAC CTGCTGTAAC TCAGGTTCTA TAATAAACAA TAAAAGAATA AGATCTCAGA 1740
CACTCACAGT CTAGTCTAAA TGCTGGCAAA CATTTTTTGT ATAAAGCCAG ATAGTAAATG 1800
TTTTAGGCTG TGTGGTCCAT ACAGCCTCTG TGGCAATCAC TTTTGCATGC AGAGCAAAAG 1860
CAGCGTTAGA AAATATGTAC ACTATTAAAT ATGGCTATGT TTGGGTTGTA GTCTGCTTTA 1920
TATACAAAAT CAGGCAACTG ACTGAATTTG GCCCACAGGG CGTAGTTTGC CAACTCTTGG 1980
TATTCAGGTA CATTTTTTTA AATTGCAAAA CAGTGAGCTG TATGTTGATG AAAGCTTCCC 2040
CTTGCATTTG CATAACATTT CATAATTTAT GAAGCTATTT CATATATATT AGCTCAAAAT 2100
TTAATCCCTC ATACCAACCC TTTAAAATAG GTAGGTCTTA TTATCTTCAT TTTATAAATA 2160
AGAAAACTAA GGCTCAAATA AATTAATTTC CTTAAGTCAT CATATAGGTA GAGATGGAGC 2220
TAAGATTTGA GCTTCCACCT TACAGGCGTA GATTACTAAA TGCTCACCAA AACTTACTTC 2280
CTCTTCCTCC AGTGCACACA GACCGACTGC ATTTTCCAGA CTCCTTTGCA GTTGGGTGTG 2340
GCCATGTGAT TAGGTTCTGG CCAGTGGAAT TTGGGCATTG CCCTTTAAAA CTTCCTCATA 2400
AAAACTGGCT AACATGATCC TCTGCTTTCT TTTCTCCTTC CATTTGGCCA GAGGAGGTAC 2460
TCCTAGGGTA ATCTTTTGGG TAACATGTTG ACAACAGCAG AACCACAAGA CAGAAGCAGC 2520
CTGGGCCGCT GAATCATCTC TTGGAAGAGA GCCACTCAAG CAGGAACACT TGTATTAGAC 2580
TGGGAAAGCA GTAAGAAATG TGTATTAAGC CACTGAGATA GCTTTATCTG CATATTACTT 2640
TAGCTAATAG AGCCTGTGCC CAGGTCCAGT GTTGTTTGCA TTCAACTATA GCCAAGATGC 2700
AAAGGATGAG TTTACCAGGC CAATGAGACA GAAGAGATCA TATTTCAGAA GGGGACATTC 2760
AGGCAAAGCA AAGAGTGCTT TCAAGAAAGA AGAAATTGTT CTACATGGTT AAATAGTAAA 2820
CTAGCAAGGT AGTGGAAGGA GAGGAGGCAA AGATAAGCAC TGGGAAAGAC CTGTGCCAAC 2880
ACTGCGGTAA AAGGACTTGG AGAGAACAAG AGACAGCAAT TAGATCTGCC TCTAGCACAC 2940
TCAATCTAAG GAAGAAGAGG CTGGAGGCAG GGAGACCACC CCTAGAGTCT GATCAGCCCC 3000
GGCCTCACCA GAGCAGAGCT GTGAGCCGGC 3030