EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS167-00524

Organism

Homo sapiens

Tissue/cell

Retina

Coordinate

chr1:10716790-10718560

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr1:10717847-10717867

GGTGGGGGGGTGGGGGCGGG

6.17

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_26713	chr1:10717993-10718646	Esophagus
SE_31374	chr1:10711440-10717991	Gastric
SE_31374	chr1:10718063-10720764	Gastric
SE_33519	chr1:10715498-10720057	H2171
SE_41555	chr1:10718120-10718717	LNCaP
SE_54510	chr1:10711383-10754578	Stomach_Smooth_Muscle
SE_65281	chr1:10716687-10717628	Pancreatic_islets
SE_65281	chr1:10718267-10719218	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I010655

chr1

10715499

10720806

Enhancer Sequence

AACCTGGAGG GAGGAGGGGT GGGGTCAGGG CCCTGCTGTG GGTGACAGTC CCAGCCCCAG 60
CCCCAGCCCC AGCCCCAGGG AGGACTCTTC GGGCCCTGTA TGGGATGCAG AGGGGAGGTG 120
AAGTTGCAGA GGCCCAGGCA AGTGACTGGG CCTGGCGGGA ATCCCAGGCC CATTGAGGCA 180
AAGAGGCCTG GCCCCAAGAA AGGGGCAGGA CAACACTGAG GTGGCCAAAA GTCAAAGTAG 240
GGGGAGACAG ATGGGGCCCG AGCCCTGGGA TGGAAGGGAA GGCAGGCGCC CCCTCGGCTG 300
CCCACCTGTC TTTTCTGCAG GGGCTACCTG CCCCACTCCC AGCCCGCCCA GTTCTGGCCA 360
GGTGCAGAGA CCCTGGCTGG GCCAGCCGGG CTCTGATGCT GAGAGGTGTT AAAGGGCTCT 420
CTCTGTCCTG GGCTTTTCCT GACACTTGAA ACAGTGCAGA GCTATGAATT TTTAAAGCAC 480
AGCATCTGTT TGGCTTCCTA CAGCAACGAG CTCACTCTCC AGCCGCCGCC GCCACCGCCA 540
GGAACCTGTG CTGCCTCCCA GGAAACCCGT CCTCCTCCAG GCCCCAGGGC CGCTGGGACG 600
TGGCTCCCAC AGCCTCGGTG ACGGCCGGCC GTGGGGAGGC CACTCTGGAG AGGCCACACC 660
ATGACGACTG TGGAGAAGGG TGTGACTCAG CCCGCCTGTA CCCCTCCAAG ACTGAAGTGA 720
GATTGCAGGA GACACAGAGA GAAACCCCAT ACTGTAATGG GAAAACCACG TGCAAACAAA 780
TATTTAGGCT GAAGTGGCCA AAAGGGCCAT CTGCGGAGGC ACTAATAATA ATGGTAATAA 840
TAATACCACA GAGGAGACAG CACGGGGCAG AGCTGAAGAC AGAGTGGGAC AGGGGGGCGG 900
AGACAGTGGG ATGGGGGTGG ACAGAGACAG AGCAGGACAG GGGATCGGAG ACAGAGTGGG 960
ACGTGGAGGC GGAGAGACAG AGCGGGCGGG AGGAACCTGG AAGATCTGCG GACAGACAGG 1020
CGCCAGCCGC TGGGTGCTGC CCCATCAGAG GGCAGGCGGT GGGGGGGTGG GGGCGGGGGG 1080
TGTTATTTGT GTGATTTGGG GGAATCTGTT GAGGCAAAGG CTCTTCACTG CCAATCCCAC 1140
TGCCTTTGGG ATGGAAAGGG GTTGGTCTGG AGTCAGGTGG TGTCAGAGCC TCACTGGGGA 1200
AGTGCATTGG GCTGTGTCAG AGAGGACGAC AGCCCACACC TTCTCTCTCG CTTTCTCTCT 1260
CTCTTTTTTT TTTTTTTTTT AAAGAGATAG GGTCTCACTC TGTTGCCCAG GATGATCTCA 1320
AACTCCTGGC CTCAAGTGAT CCTCCCATCT TGGCCTCCCA CAGTGCTGGG ATTACAGGCA 1380
TGAGCCACTG CACCTGGCCT GCCTCTACCT TCCCAGCCCT GACAGTTTCA CGGTGGCCTG 1440
CACCCTACTC AAGGCTCTGT GTGACAGCAG GACCCAGGCA AGCTGGGGGA GCTGCACTCA 1500
CCTGTGGCCA GGCCCTGCGT CGGGACCCCG GCCCTAACTG GGGGCACAGG CTGCTGAGGG 1560
AATGTGTGGC CTGGACTACA CAGAGCGGAG GGAGGCTCCC AAACGGGCGT GCAGGGCAGC 1620
CCTCGGTGCG GTGGAGGGAC CGAAGTGGAT GGGGATGGGA GGAGGCAGCT ACCTTGGCCC 1680
TAGAGGTCAG ATATCAAACG AATGGCCTCA GAGTGCCCGG TCAGTCCTGG CCCCCCACCT 1740
TCTCTCCACG GCAGGCTCCT CCCCAGGGGC 1770