Tag | Content |
---|
EnhancerAtlas ID | HS165-06490 |
Organism | Homo sapiens |
Tissue/cell | Ramos |
Coordinate | chr18:3660190-3661990 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr18:3660945-3660966 | ATAGAGAAAGAGGAACTAAAA | - | 6.22 | MEF2C | MA0497.1 | chr18:3660317-3660332 | TTTTTAAAAATAGCA | + | 6.19 | Nr5a2 | MA0505.1 | chr18:3660219-3660234 | CCTGGCCTTGAACTT | - | 7.8 |
|
| Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
SE_13744 | chr18:3658233-3661983 | CD34_Primary_RO01536 | SE_14585 | chr18:3657876-3662931 | CD4_Memory_Primary_7pool | SE_20862 | chr18:3657967-3662099 | CD8_Memory_7pool | SE_34235 | chr18:3659476-3662080 | HCT-116 | SE_39894 | chr18:3659184-3661913 | K562 | SE_47120 | chr18:3659444-3673505 | Panc1 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr18 | 3660906 | 3661002 | chr18 | 3661317 | 3661540 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH18I003658 | chr18 | 3658503 | 3662112 |
|
Enhancer Sequence | GGGGGTGGGG GTCTCACTTT GTTGGCCAGC CTGGCCTTGA ACTTCTGATT TCAAGCAATC 60 CTCCAGCCTC AGACTCCCAA GTAGCAGGGA CTACAGGTAC CTGTCACCAC AACTGGCTTT 120 CTTTTATTTT TTAAAAATAG CACTTTTCAC TGTTTGCAGT TATCTCATTG ATTTCACATC 180 TGCGTCCTTG TTTACCTCTG TCCTCCTCAT TAGAATATAA TCAGAAGGAG AGCAGGAACC 240 TGGTCTGTTT TGTTTGCTGC TGTAACTCCT CTGCCCAGAA ATTTGTAGCA TAGAGCAAAC 300 ACACAAAAAA TATTTACTGA ATGAAAAGGT GATCATTCCC GAGTATCCTC AAGGAGGATC 360 TTATCAATCC CAGCAAATGT ACTTCAAATA CGTTATTTCA ATTATGGATG TTATTGAGCT 420 GAGTACTGAG ATTTCATTAT ATTGACCACT GTCTATTTCT ACTCAGAGGC TGTTCTTTAT 480 AGGGAGTTAG TCAAAATCTA TGTGCAGAGT GAATACATAT AACTTGCAGT AAATATTTAG 540 GTGTTTTAGG GTTCCAATAT TGGCAAGGTA TCTGACAAGT AAGTTTATTG GCTACTTGGA 600 GACAAAATTA CGCCCTAAAT GGACTTCAAG AAATATTAGT TAACTAACTT TATATTCAAA 660 TACCTCAATA ATCTGCAGTT CTCTTGTCTC AACTGTCATC ACCCTGGGCC AAATTATGAC 720 AGCAATGTTC ACAGGAAACT GTATGATAAG GCACAATAGA GAAAGAGGAA CTAAAAAAGA 780 ACTTCAGCCT TTAATATCCT TTTTCTAAGT TATTCCCATG CTGCAGGTGG AGAGACTTTT 840 TCAAAAGATC ATGTGACAGC CTTCCAACTC TTATTTTATT CATTTATTTT TTAGATGAAG 900 TTTCACTATG TTTCTTAGGC TGGTCTCAAA CTGCTGTGCT CAAGTGATCC TCCTGCCTCA 960 GACTTCCAAG TAGCTGAGAT TATCGGCATG TACCAGAGTG CCCAGTGAAA TTCTTAAGAC 1020 AAAAAGCCTT AACATGACTG CAAAACCCTC TATGATGTCA CTTATAGGTG AATAAAAATG 1080 GCCACAAATT CTTCCACACT CCTCCCACAG ACAGGTGGAG GCTATGTCTC CTCTCCTTGA 1140 ATCTGGGTAA GCTCTGTGGC TGCTTTGACC ATTAGAATAC AGAGGAAATG ATGCTGTCTG 1200 CCCAGATCTC ATGAAACAGG CAGCTTCCCC TCTGGTGTCA TGGACCACTC CCTCCGGGAA 1260 GCCTGAGACA GCAGGTTACA AGTCCTGAGA CGGTCCTGAT GGAAAGGCCA CATGCAGACA 1320 CTCATAAACA TCAGCTGAGC CTAAGTGTCA AGTTTAGGCA GAGGGAAGAA GCTGTAAGGT 1380 CTTTTTTTTT TTTTTTTTTT TTTTGAGACA GAGTTTCACT TTGTTGCCCA GGCTGGAGTG 1440 CAGTGGCACG GCCTTGGCTC ACTGCAACCT CCGCCTCCTG GGTTCAAGCA ATTCTCATGC 1500 CTCAGCCTCC CACGTAGCTG GGATTACAGG CGCCTGCCAC CATGCCTGGA TGATTTTTTT 1560 TTTTGTATTT TAGCAGAGAT GGGGTTTCAC CATGTTGCTC AGGCTGGTCT CGAACTCCTG 1620 AGCTCAGGCA ATCCGCTCAT CTTGGCCTCC CAAAGTGCTA GGATTACAGG AGTTAGCCAC 1680 TGCTCCCGGC CAGCTGTAAG GTCTTGAGAA GACTGCTGGT GAAGGCTGGG AGGACTGAAA 1740 ATTGTCACTG GAGCCTGGAG AAAAGGTAAC TCTATTAATG TAGTGGCAGA GAATTTGCTA 1800
|