Tag | Content |
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EnhancerAtlas ID | HS164-10834 |
Organism | Homo sapiens |
Tissue/cell | Raji |
Coordinate | chr6:52254260-52256490 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr6:52254495-52254510 | AGTTAATGTTTAATT | - | 6.56 | JUN(var.2) | MA0489.1 | chr6:52255377-52255391 | AGGAAGTGACTCAC | + | 6.15 | Lhx3 | MA0135.1 | chr6:52255573-52255586 | TAATAATTAATTT | - | 6.25 |
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| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_03340 | chr6:52253085-52255876 | Brain_Angular_Gyrus | SE_04214 | chr6:52253002-52256108 | Brain_Anterior_Caudate | SE_04214 | chr6:52256220-52257204 | Brain_Anterior_Caudate | SE_04963 | chr6:52250679-52259985 | Brain_Cingulate_Gyrus | SE_06207 | chr6:52251162-52257636 | Brain_Hippocampus_Middle | SE_06960 | chr6:52252878-52258020 | Brain_Hippocampus_Middle_150 | SE_08050 | chr6:52250972-52259364 | Brain_Inferior_Temporal_Lobe | SE_12385 | chr6:52253060-52257034 | CD3 | SE_16054 | chr6:52253695-52256439 | CD4_Naive_Primary_7pool | SE_17578 | chr6:52252868-52267051 | CD4p_CD25-_CD45RAp_Naive | SE_19089 | chr6:52252884-52266905 | CD4p_CD25-_Il17-_PMAstim_Th | SE_21851 | chr6:52253151-52257043 | CD8_Naive_7pool | SE_58572 | chr6:52147442-52265048 | Ly1 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr6 | 52254281 | 52255602 | chr6 | 52255784 | 52255834 | chr6 | 52255964 | 52256018 |
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| Number: 1 | ID | Chromosome | Start | End |
GH06I052388 | chr6 | 52253119 | 52256859 |
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Enhancer Sequence | GGGCAAGCCT GATGTTCTCC TTACCAAAAT ATGTGGAATA GATAGATAAG GGTTGGGGGC 60 GGGGGAGGAA TCAAGATGGC CTGGAGAAGG CTTTGTGGTG ATTTGGAATT GAACTAAGGC 120 CTTGGAGATA TCTAAGGAGA AATGAAGAAT AAAGTGACTT GCTTGACTCT TTATAGCAAA 180 TAAAATTGCT GGGTCTTAGA ACCACCAGGA GAGTGTACTG TTGTCACTGC AGAAGAGTTA 240 ATGTTTAATT GCTAGGGAAC ACAGCTTTCT TTATATGGTG CTCCAAACTC TAGCTCGATT 300 TGTTATCTGA TTTTCTGCTG TGGAAAGGGC ATTTCCAAGA TTGATTTCCT GCCAGTGGAA 360 ATGAGCAGCT CTCTTCACGT TCACCCGGGT TGGCCCGGGT CCCAGCTGGT TTGCAGATCA 420 GTGATGAAGC TTCCTGCCGG TGAGAAGCTA GATCTAGTTG AGAGGTTGCC TGACTGAAGC 480 CAAACCACAC CTAACGAAGC CGATAGTTAC ACTCATGTAG AAAGTCCAGG GAGACACCTG 540 TCCCTAGGCT TTAATTAGTG GGAGTTTCAG ACAGCAAAGT TTACCTTTAC TCAAACAAGA 600 AGCCTCAGAA GAACATGATC TTCACACCTG AACTGTTGAT TGCCTGGAGA CTGCTCAGTG 660 TGTTCTCCCA GTAAATTGTT CCCAGCTCCT CTGACTTCTC CCACTCGACA GATTAAACAC 720 AGATACTATT TATTCCATGT GGCAGATGCA TTCTCTGTCT GTAATGATGC ATTTTGAAAC 780 CAGTACTTTC TCAAGTGAGA TTAGCTGAGA TGTGGAAAGT ATAGGAAGTG ACAGAACAGA 840 CAGAAATTCT AGCTAGAGGG TTCTAGTTAG ATAAAGAGAA AAAGGCACTC AGAGGAAATT 900 TGCTCTGCTC ATCTTTCCCA GGGCACAGCA ACAAATTAAG GCTGTCTTTT CTTTCTCCTC 960 TTAGGAATAT TATAGGGCAC CACAGAGGAA AAGATTCATA AGTGGAGAGC TCACTGAGCC 1020 CAGAAGGACA CATCTTGCTG CCAGATCTGT GGCAAAAAGG TGTACCTTAC TTTTTTTTTA 1080 TAGGCACGGT TCAGCCGTAC CACAAACCCA CATGGTCAGG AAGTGACTCA CGTATTAATG 1140 CCGTTTGAGT TTGTGTGCTG TGGGGAAGGT CTTTTGACAA TATTGTGTAT ACTGGCTTTT 1200 CCAATCTAAG AGAACATCTT TGCTGCATTA ACAGTAGATG TTACATATTT TTTTCCCTTT 1260 AAACCCCCCA TGACCAATAG CTTACCCTAT GGCAAGTATA GTTAGGTTAC TCGTAATAAT 1320 TAATTTGGTA TGCTAACTAG TTGAGCTCAC AGAAAAATGC AAGTATGGGT GTATTCCTTT 1380 ATAATGCTGG GGTGTTTCTT GGGGAGGGTC TTAATATTTT ACCAACTTAG GTTTTACCAA 1440 TTTTTGCATA TTTATGTCAA ATATTCCTAT TTGCAGAGTA GTACTAACTT TTGCTTTCCA 1500 ATTACAAAAG TAGTAAATGT TTGTTGTTAA AAAGTACGAT AATGATAGTA TTTCCAGAAG 1560 AAAAGTAAAA TTCCCCACAA TCCCTTCATG GCAATAGCTA TATTGTTTTG ATTATATGCA 1620 CTTCCATACT TCATCTGTAC CATGTTTGTA TGATTACAAA AATAGGGCTG GGCGGAACAC 1680 ATACTTTAAA TTTGTTTTTT CCTTTACATG TCTTTGACTC ATTTATTCAT TCAAGAAATC 1740 TTTTTTGAGA ATGTACAATG TGCTAGTCCA TCACTTTTCT AAGTGCAGTG GAGACTACAG 1800 TGAAAAACCA ATGGAGCTCA CATATCATGT GTATCTTTGT ATAACAATAA ATGTAAATAT 1860 GCTAGTTATT TTAATAAGTG CATAGTATTC TATTTTATAG ATTTATCTTA ATTTACACAA 1920 TCAAATACTC CATTTTTGGA TGTCGAAATT CTGTTTGTTA GGTTTTGTTA AATATAGGGA 1980 GGAAATATGC ACTGACCATT GGTGAATCTG AATCGATGTT CAAATGATCT CTGCTAATAA 2040 CAGGATTGCA CTGGTAGTGC CATTCTTTCA AATATGACTT TACAAATAGT GATATGCTCC 2100 TTGGAAGATG TAGCTATAAA GATCAGTATG AGCCCAGAGT TCTCTCACTT AACGACTATG 2160 GAGATCCTGA GGCATGTGAG ACTGTTTCCA ACTCCACCTC TGGCTCAAAG GCTGCTTAAA 2220 GCACAGTTCC 2230
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