Tag | Content |
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EnhancerAtlas ID | HS164-07726 |
Organism | Homo sapiens |
Tissue/cell | Raji |
Coordinate | chr20:30254040-30256440 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA | MA0071.1 | chr20:30254891-30254901 | ATCAAGGTCA | + | 6.02 | SPI1 | MA0080.4 | chr20:30255263-30255277 | AAAAAAAGGAAGTA | + | 6.3 | SPIC | MA0687.1 | chr20:30255263-30255277 | AAAAAAAGGAAGTA | + | 6.79 |
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| Number of super-enhancer constituents: 50 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30251593-30255062 | Aorta | SE_01656 | chr20:30255172-30256252 | Aorta | SE_03156 | chr20:30251628-30255068 | Brain_Angular_Gyrus | SE_03156 | chr20:30255149-30256302 | Brain_Angular_Gyrus | SE_03894 | chr20:30251234-30256284 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30251224-30256437 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30249036-30256401 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30254242-30254774 | Brain_Mid_Frontal_Lobe | SE_08789 | chr20:30255411-30256162 | Brain_Mid_Frontal_Lobe | SE_13448 | chr20:30254128-30255176 | CD34_Primary_RO01536 | SE_13448 | chr20:30255335-30256360 | CD34_Primary_RO01536 | SE_14426 | chr20:30251256-30256364 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30253825-30255097 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30254046-30255079 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30251268-30256502 | CD56 | SE_20764 | chr20:30252184-30256407 | CD8_Memory_7pool | SE_22440 | chr20:30251269-30256411 | CD8_primiary | SE_25330 | chr20:30251098-30256224 | DND41 | SE_30903 | chr20:30251126-30256247 | Fetal_Thymus | SE_31430 | chr20:30251145-30256293 | Gastric | SE_34309 | chr20:30251340-30255178 | HCT-116 | SE_34309 | chr20:30255280-30256381 | HCT-116 | SE_39443 | chr20:30253916-30254474 | Jurkat | SE_39853 | chr20:30253476-30255101 | K562 | SE_39853 | chr20:30255212-30256259 | K562 | SE_40644 | chr20:30251193-30256255 | Left_Ventricle | SE_41648 | chr20:30251726-30254586 | LNCaP | SE_41648 | chr20:30255535-30256127 | LNCaP | SE_42121 | chr20:30251496-30256350 | Lung | SE_47264 | chr20:30251190-30256311 | Panc1 | SE_48182 | chr20:30252376-30255098 | Psoas_Muscle | SE_48182 | chr20:30255162-30256349 | Psoas_Muscle | SE_49346 | chr20:30251223-30255077 | Right_Atrium | SE_49346 | chr20:30255165-30256336 | Right_Atrium | SE_50155 | chr20:30251132-30255104 | Sigmoid_Colon | SE_50155 | chr20:30255128-30256246 | Sigmoid_Colon | SE_52373 | chr20:30251406-30255074 | Small_Intestine | SE_52373 | chr20:30255135-30256220 | Small_Intestine | SE_53471 | chr20:30253670-30256253 | Spleen | SE_55108 | chr20:30254034-30255039 | Thymus | SE_57201 | chr20:30254084-30255003 | VACO_400 | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_65412 | chr20:30251623-30256414 | Pancreatic_islets | SE_66334 | chr20:30253916-30254474 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 30254323 | 30254942 | chr20 | 30254400 | 30254942 | chr20 | 30255195 | 30256000 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I031661 | chr20 | 30248961 | 30259586 |
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Enhancer Sequence | GTCCTCTTTC TTGACCCTCC ATTGGTGATA ATCAAACCAT GTTACTGCTG AGAAACAGGT 60 AGAGAGGAGG AAAGTGCCCT GTCTGAGGTA AGTCAAGAAG TAGCACTTAC TCCAGAATCC 120 AAGGTGGGAA CGAGATGGGC AGGGTCAGGG AACTGATGGA AGCCAGGTGG CTGGAGCAGA 180 GTGCAGGAGA GGAGGGCATG GGGGAGATGA TGGTGCAGGG GTGAGCAAGA GCCAGACCAT 240 ACGTGGCCTG GAAGCCGCAA GGAGCCTAGA GTTGAGTCTG AGGGTAGTGT GGAGTGTGGA 300 GCCACTAGGC CTCAGATTTT CTACTGCTGC ACCAGAGGGA GGGATAAGGA AGCCCAGGGC 360 TAAATCCCCA GGGTCATTTG AGGCCAATTC AGGGGTAGAA TGGGTCCTGG GACTTCAGCC 420 AGAGGCTCCT CCCTCTGGAG GGAGCCTCTG GTGGGCAGGT TGGTGACAAG AAGAGCAGGG 480 CAGAGGAGAG AGGGTAACAA TGATGCAGGA CTGACAGGCC TCCATCACGG GGTCTGTGAG 540 GCCTTGTCCC GGACATCCTC CACTGCAGGG GGTGTGACTC TGGGCCCAGG AGGTTGTGAT 600 CAACAGCCCT CTGCCCTGAA TCTAAGTCAG AAGGGAAGCA CATGACAGGG GGAAGGAGGA 660 GCTGTGGGCT AAATTACCCA GCCCAGGGTG CAGCAGCCTG TGGGGCAGGG AGAAGGACGC 720 TTAGAACATA ACTTTTATGA GTAAGCGTAG TACCCAATTT GTCCTTTAAT CCTCCCAACA 780 ATTCTGCAAT GCAGGCTGTC TCTCCCCATT TACAGGCCAA GAAGCTGTGC CTCTGAGGGT 840 CCAGGGACTG GATCAAGGTC ACCCAGCTGT GTCAGTGGTG GAGCCAGAAT CTAAAACTGG 900 CATCTGGCAC CTAGAAATAT GTAAGAAAGA AGTAAGTTCC AGGCTGGGTG CGGTGGCTCA 960 TGCCTATAAT CCCAGCACTT TGGGAGGCTG AGGTGGGTGG ATTGCCTGAG GTCAGGAGTT 1020 CGAGACCAGC CTGGCCAACA TGGTGAAACC CTGTCTCTAC TAAAAATACA AAAATTAGCC 1080 GGGTGTGGTG GCACGCACCT GTAATCCCAG TTACTCAGGA GGCTGAGGCA CGAGAATTGT 1140 TTGAACCCGG GAGACGGAGG TTGCAGTGAG CAGAAATCGC ACCACAGCAC TCCAGTCTGG 1200 GTGACAGAGA CTCCGTTCAA AAAAAAAAAA GGAAGTACCA TAGTACCGTG TGTGTGTGTG 1260 TGTGTGTGTG TGTGTGTAAA ATGAATGAGT TACTGGCTGG TTCTTGCCTC TCTACCAAGA 1320 CCTCTGCCAC ACTGGGCCTA CATTTCCAAC CAGTCCCAAA TGGCCGAGTG GCTGCTCCCT 1380 CAAGACAGGC ATGCCATCTC CAGTTGGCCT CAGGTCTCAC CTATCAATTT GCTCACTTGT 1440 GACCCCTGCC GTGGCCCACT TCCAGTCTTG ACAACCCCCT CAGTCCATGC TCCACACAGA 1500 GCTTTCTAAG AACACTGGAA GCCCTCCAGC AGCATTCTCC TGCACTTAGA AGGGCAGCAT 1560 CATTTATTTT TGTATCCCTG GTACCTAGCA AAATGCCATG TGCACTGAGC TGCTAATTTG 1620 ACTGAAGGAA TCCTCAACAT TAAGGCAGTA GAGAGCAGTG ACCCATGAAT CTCAGCCCTT 1680 GCAGAAGCAC ACTCCATTCA GTCACTCCAA GTTCTCAACC TTCCCAGGGC TTCCATCACA 1740 CCTGAAATAA AGTCCCCACT CCTTACTCTG GCCAGCAAGG TCTAGTGGGA TCTGGCTCCA 1800 ACACTTTCTG GCCTCCTCCC CACCCCTGTC CCCTGAACTT CACTCCAGTC CCACTGGCCT 1860 CCTTGCTGTT CCTCCAACGT CTCCTGCCGC AGGAGTCTGC TGTTCCTGCT TGCCTGGAGC 1920 ACCTGACCCC AGGTCGTCGC CTGCCTCACT CCCTCATTTC ACAACCATGA CTCCCCTCAA 1980 ATGTCACCTC CTAGGGGAGG CCTTCCCTGA CTGCCTTGTC TAAAACAGTA CACCACCCCC 2040 GTCTCTCTCT GCCTGTCCCC TTACCTTCCT TGATTTTTCT TCTCAGTTTT TTTTTTTTTT 2100 GAGACACAGT TTTATTCTGT CCCCCAGGCT GGAGTGCAGT GGCACAAACT GGGCTCACAG 2160 CAACCTTTGC TTCCTGGGTA CAAGCGATTC TCCTGAGTAG CTGGGATTAC AGACATGTGC 2220 CACCATGCCC AGCTAATTTT TATATTTTTA GTAGAGATAA GGTTTTGCCA TATTGGCCAG 2280 GCTGGTCTCA AACTCCTGAC CTCAAGTGAT CCGCCCACGG CCTCCCAAAG TGCTGGGATT 2340 ACAGGCACGA GCCACCATAT CTGGCCTTTT TTTTTTTTTT TTTGGAGACA GAGTTTTACC 2400
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