Tag | Content |
---|
EnhancerAtlas ID | HS164-06482 |
Organism | Homo sapiens |
Tissue/cell | Raji |
Coordinate | chr19:48833810-48834770 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr19:48834680-48834695 | TGAACTCCTGACCTC | - | 6.22 | STAT3 | MA0144.2 | chr19:48834071-48834082 | CTTCTGGGAAG | + | 6.14 |
|
| Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
SE_10529 | chr19:48832347-48834597 | CD19_Primary | SE_11712 | chr19:48831565-48838280 | CD20 | SE_12093 | chr19:48832763-48834441 | CD3 | SE_12608 | chr19:48833806-48834151 | CD34_adult | SE_14876 | chr19:48832406-48838181 | CD4_Memory_Primary_7pool | SE_15714 | chr19:48832523-48834412 | CD4_Memory_Primary_8pool | SE_16719 | chr19:48832593-48834458 | CD4_Naive_Primary_8pool | SE_16942 | chr19:48832368-48834432 | CD4p_CD225int_CD127p_Tmem | SE_17436 | chr19:48831591-48838551 | CD4p_CD25-_CD45RAp_Naive | SE_17934 | chr19:48823107-48838029 | CD4p_CD25-_CD45ROp_Memory | SE_19071 | chr19:48832225-48834681 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19484 | chr19:48832196-48834549 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20154 | chr19:48832265-48834463 | CD56 | SE_21067 | chr19:48832541-48834458 | CD8_Memory_7pool | SE_22604 | chr19:48831651-48834570 | CD8_primiary | SE_24623 | chr19:48833408-48834228 | Colon_Crypt_2 | SE_30042 | chr19:48832923-48834576 | Fetal_Muscle | SE_30042 | chr19:48834600-48837751 | Fetal_Muscle | SE_31283 | chr19:48832222-48834538 | Fetal_Thymus | SE_32114 | chr19:48833220-48834354 | Gastric | SE_43243 | chr19:48832262-48834491 | Lung | SE_50696 | chr19:48832273-48834460 | Sigmoid_Colon | SE_50696 | chr19:48834642-48837681 | Sigmoid_Colon | SE_53131 | chr19:48832284-48834454 | Small_Intestine | SE_53689 | chr19:48832260-48834571 | Spleen | SE_55427 | chr19:48833239-48834304 | Thymus | SE_61745 | chr19:48812050-48838056 | Toledo | SE_62792 | chr19:48823404-48838135 | Tonsil | SE_65804 | chr19:48833158-48834818 | Pancreatic_islets | SE_66837 | chr19:48832408-48834396 | Jurkat | SE_67083 | chr19:48832713-48838692 | H2171 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | GCTCTGCCTT GATCTTCCTT CCTTCCGCCT CCAGGGACCC AGGCTGCGCA CGCTTGACCT 60 CTCCTGAACC TAACATGGTC CCCACCGCCA GCTGCTCAGC CCTCAGAATG CCCATCTCCC 120 AGCCCCCAAC CCCTTCCTCC CGAGGACACA GGAGCCGGGA CCCCAGGCAC CTTTTCCCTC 180 CCACAGACCC AAGAGCCTGG GCCTTCCCCG CTCAAGGCCC AAGAGACCTC TGTGAGGCAC 240 CTGAATCTAG ACCTTCAGAC ACTTCTGGGA AGAACCTGGA TTCTGGGTCC CAGCAGACCC 300 TGTTAGGATA GGAAGCCTGC AGTGACCAGT CCTGTCTCCT TGCTCAAGCT TCTGTCACTC 360 TGTTGCTCTC TCTCTCTGAA CCCCGGGCAT AGTGTGTGTT TCTAGATTGT CGGACTCTTT 420 TTTTCTTTCT GTCCAGGTTG GAGTGCAGTG GTACGATCTC AGCTCACTGC AACCTCCGCC 480 TCCCGGGTTG AAGCGATTCT CCTGCCTCAG CCTCCCGAGT AGCTGGGACT ACAGGCACGA 540 GCCACCACAC CCGGCTAGTT CTGGACTCTT TTTTCTTTCT ACTAACTTTC CATTTGGGAA 600 GACAGCTTTC TTTTTCCCTC TAGGAAACCA GTCTCCCTCT CTCTCTTTTT TTTTTTTTTT 660 TTTTTTTTTG AGACGGAGTC TCGCTCTGTC ACCTAGGCTG TAGTGCAGTG GTGCGATCTT 720 CACTCACTGC AACCTCCGCC TCCCGGGTTC AAGCAATTCT CCTGCCTCAG CCTCCTGAGC 780 AGCTGGGATT ACAGGCGCCC ACCACCACGT CCGGCTAATT TTTGTATCTT TAGTAGACAC 840 GGGGTTTCAC CATGTTGGCC AGGCTGGTCT TGAACTCCTG ACCTCAGGTG ATCCACCCAC 900 CTCAGCCTCC CAAAGTGCTG GGATTACAGG CGGGAGCCAC CGCGCCCAGC CCAGTCTCCC 960
|