Tag | Content |
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EnhancerAtlas ID | HS164-06205 |
Organism | Homo sapiens |
Tissue/cell | Raji |
Coordinate | chr19:18132250-18133940 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | Nr2f6(var.2) | MA0728.1 | chr19:18133768-18133783 | TGAACTCCTGACCTC | - | 6.22 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 | SP3 | MA0746.2 | chr19:18133699-18133712 | CACCACGCCCACC | + | 6.48 | SP8 | MA0747.1 | chr19:18133700-18133712 | ACCACGCCCACC | + | 6.32 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | GCCCAGACAT GGGCTTTGAA CCCACGCCAG GGTATGCACA AACCTATCCA AACACACGCG 60 TGTCTGCCCT AGCTTCCCTC ACCCGGGAGT CACCCCCCCA CCCCCCACCT TGTTTTTGAT 120 GTTCAGGAAA GTCCCCAGAA AGCACTGGGC CCGGGCAAGG GGCCAGGAGG AAATGGTGAC 180 TCAGCCGGTG GCCATCAGTG CCTGCCACGC TGGGCTGGGT GGACTGCGCG GCCCGATCTG 240 GGAGGATCCA CAGAAAACAA CAATAAAAGA TGAGGGCGTG GGTGCGGGGT AAAAAGGACT 300 CAGCCCAAGA ATGATCAGAG AGGGGATGGA TCCCCCTGTG CTCCAACACT TCAACCCTGC 360 TGGGCCTGAT TGACAAGTGG GGAAACTGAG ACACAGGGAA CAAGTGACTT CGCCAAGGCC 420 CACCAGCCAA GATGGTACAG GCAAGGGGAT CCCTAAGTCC TTAACACAGG GGTCTGGAGG 480 AATGTCTACC TGCCCTGCCC TTTTTTTTTT TTTTTTTTTT GGAGACAGGG TCTCACTCTG 540 TCCGTCAGGC TGGAATGCAG TGGCATGATC TCAGCTGACT GCAATCTCCG CCTCCTGCCT 600 CAGCCTCCCA AGTAGCTGGG ATTACCGGCG CCTGTCCCTA TGCCCAGGTA ATTTTTGTAT 660 TTTTAGTAGA GATGGGGTTT CACCATGTTG GCCAGGCTGG TCTCAAACTC CTGACCTCAG 720 GTGATCTGCC CACCTCGGCC TGCCAAAGTG CTGGGATTAC AGGCGTGAGC CACAGTGCCC 780 GGCTCCCTGC CCCACTTTCT GAGACCCAGA TCCACTTCCT GGTTTCCTGT GTGGTCATGT 840 GACCACACTT GGCCAATTGG AGCCTTTTGT TATCACAGGC ACAGGGATTG GGTCAGGGCT 900 GGGCACGTGA TCCTGCCTGA GCCAATCATG CTACGAGTTT GGAGACTCCC TGGAAGAAGG 960 CCTAGAAGTA AGGAAAACCA TCTTGGACGC ATGATGATGG CAGTGGATCA GAGTCCCAAG 1020 GACACTGGTG AAGATCAGAG CAGGACTCAC ACAACCTCAG ATCCCTGTGG AGTCAGGGTG 1080 GAACCAGAGG GAAGGCTGAA GGCTGGAGGG TCCTGAGAGG CCTTGCAGAA AGAGAGGACA 1140 TTGGAGCTGG GGCTTTGATG GATGAAGAGG AACTAGGGAA AGGCATTTCA AGCAGAGGGA 1200 ACAGCCTGTG CAACCACAGC AGGCAGGTGG GAGCTAGGCG TGTCCTCAGC CACCCCAGTG 1260 GCCCCATGGG GCTGGAGCAT AGAGAGGCAT CTGCAAATGT GTTTATTTGT TTATTGAGAC 1320 GGAGTTTTGC TCTTGTTGCC CAGGCTGGAG TGCAGTGGCG CAATCTTGGC TCACTGCAAC 1380 CTCCGCCTCC CGGGTTCAAG CGATTCTCCT GTCTCAGTCT CCTGAGTAGC TGGGATTACA 1440 GGCGCACGCC ACCACGCCCA CCTAATTTTT TGTATTTTTA GTAGAGACGG GGTTTCACCA 1500 TGTTGGCCAA GCTGATCTTG AACTCCTGAC CTCAGGTGAT CCACCCGCCT TGGCCTCCCA 1560 AAGTGCTGGG ATTACAGGCG TGAGCCACTG CGCGTGACTA TTTATTTATT TTTTTAGATG 1620 GAGTCTCACT CTATTGCCCA GGCTAGAGTG CAGTGGCACG ATCTTGGCTC ACTGCATCCT 1680 CCGCCTCCCA 1690
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