EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS161-15755 
Organism
Homo sapiens 
Tissue/cell
PC3 
Coordinate
chr9:134258060-134260480 
Target genes
Number: 5             
NameEnsembl ID
TF binding sites/motifs
Number: 10             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Foxd3MA0041.1chr9:134258960-134258972GTTTGTTTGTTT+6.32
IRF1MA0050.2chr9:134258969-134258990TTTTGGTTTTGGTTTCTCTTT+6.66
IRF1MA0050.2chr9:134258975-134258996TTTTGGTTTCTCTTTTTTTTT+7.49
Lhx3MA0135.1chr9:134260390-134260403AGTTAATTAATTT-6.74
NFYBMA0502.1chr9:134260345-134260360GCATGAACCAATGAG+6.14
Nr2f6(var.2)MA0728.1chr9:134260160-134260175TGAACTCCTGACCTC-6.22
Nr2f6(var.2)MA0728.1chr9:134260025-134260040TGAACTCTTGACCTT-7.36
RARAMA0729.1chr9:134260022-134260040TCTTGAACTCTTGACCTT-6.24
SNAI2MA0745.2chr9:134258689-134258699AACAGGTGCA+6.02
ZfxMA0146.2chr9:134259251-134259265CCCGCCTCGGCCTC+6.01
Number of super-enhancer constituents: 21             
IDCoordinateTissue/cell
SE_01026chr9:134258146-134259130Adrenal_Gland
SE_01026chr9:134259199-134259607Adrenal_Gland
SE_07571chr9:134257965-134259139Brain_Hippocampus_Middle_150
SE_08249chr9:134257975-134259352Brain_Inferior_Temporal_Lobe
SE_24637chr9:134258632-134258991Colon_Crypt_2
SE_26264chr9:134258057-134259443Duodenum_Smooth_Muscle
SE_27033chr9:134258228-134259135Esophagus
SE_30040chr9:134257369-134259384Fetal_Muscle
SE_31919chr9:134257640-134259161Gastric
SE_31919chr9:134259225-134259510Gastric
SE_35226chr9:134258249-134259409HeLa
SE_41398chr9:134257731-134259531Left_Ventricle
SE_41755chr9:134258239-134258954LNCaP
SE_42733chr9:134257679-134259253Lung
SE_47717chr9:134258270-134259003Pancreas
SE_47717chr9:134259244-134259491Pancreas
SE_49107chr9:134258194-134259168Right_Atrium
SE_50633chr9:134258263-134258992Sigmoid_Colon
SE_53163chr9:134258230-134259159Small_Intestine
SE_54201chr9:134258458-134259188Spleen
SE_68796chr9:134257562-134259193H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr9134258318134259004
Number: 3             
IDChromosomeStartEnd
GH09I131381chr9134257371134259513
GH09I131384chr9134259661134260175
GH09I131385chr9134260223134261550
Enhancer Sequence
GTTGCCTGTC GCCCAGGCTG GAGTGCAGTG GTGTGATCTC GGCTCACAGC AACCTTCGTC 60
TCCCAAGCTC AAGCGAATCT CCTGCCTCAG CCTTCCAAGT AGCTGGGATT ATAGGTGTGC 120
ACCACCACGC CCGGCTAATT TTTGTACTTT TAGTAGAGAC GGAGTTTCAC CATATTGGCC 180
AGGCTGTTCT CGAACTCCTG ACCTCAAGTG ATCCGCCCGC CTTGGCTTCC CAAAGTGCTG 240
GGATGACAGG CCTGAGCCAC CGCACCCAGC CAGGCCCCCC ATTCCTGTAG GAGTGCACCT 300
CCCCTCAGGT GGGGCCACAT CTCTAGTGGC TACCAGACAG CGTGGGATGT CCTCCCGGTG 360
CTCAGACACT CCCATCCCCA GGCCTTTGTT CATGCTGGTC CCTCCATCTG GAATGTTCCT 420
CCACAGTCTC CGCTGATTAA ACTCTGCTCT TCCTTTAAGG CCTGGCCTCA AAAGCACCTG 480
CACCGAGAAG GCCTCCTCCG GCTCCCCAGC TGGAATCCAT TTCCCCCTGG AATATTGTTC 540
ATTTTTCCCC TTCAGTTTAG ATGACTCCAC TTTCTAAACT GAACATGGGA ACTCATGCTG 600
TGTCTCGTTA GTACAACTGC ACTGTGGAGA ACAGGTGCAG AGCATTTGAA AGCGGCCAGT 660
CCAAGAATCC TGGAACAGCT CATGACTGCA CCAGCTGGAG GCCTCACATT CCTGGATCAG 720
ATCATATTAC AAGTTAGCTG TGGCCAAATC CCTGTTATCC TCCTACCCTT TCTCGGGAAG 780
GAGGAAGCAC TAGACCACGT TAAGAGCCAG GTCCCAAGAT ATTCAGGCCC AGCTTAGGCT 840
GTGTCTGGCA GGTAGTGAAA GAAAGCTCAC GAAATCAGTC TTTATTCTTG TAGGGTTTTT 900
GTTTGTTTGT TTTGGTTTTG GTTTCTCTTT TTTTTTTTTT TTTTTTGAGA CAGAGTCTCG 960
CCCTGTCACC CAGGCTGGAG TGCAGTGGCC CAGGATGGAG TGCAGCGGCT CGATCTCGGC 1020
TTACTGCAAC CTCCGCCTCA TGGGTTCAAA TGATTCTCCA GCCTCAGCCT CCCAAATAGC 1080
TGGGACTACA GATGCCCACC ACCATGCCCA GCTAATTTTT TGTATTTTTA GTAGAGACAG 1140
GGTTTCACTG TGTTAGCCAG GATGGTCTGG ATCTCTTGAC CTCGTAATCC ACCCGCCTCG 1200
GCCTCCCAAA GTGCTGGGAT TACAGGCATA AGTCACTGCG CCCGGCCGGT TTTGGTTTAT 1260
TTTTTGCGAC AGGCTTGCTC TGTCACCCAG GTTGGAGTCC AGTGGCACAG TCATGGCTCC 1320
TTGGACCCTC TGCCTCCTGG GTTCAGCTGA TCTTCCCACC TCAGCCCCTG AGTAGCTGGG 1380
ACCACAGGCA CGTACCACCA TACCCGGCTA TTTTTTTTTT TTTTTTTTTT TTTGGAGACA 1440
GAGTATTGCT CTGTTGCCCA GGCTGGAGTG CAGTGGCACG ATCTCAGCTC ACTGCAACCT 1500
CTGTCTGCCT CCCGTGCTCA AGCGATTCTC ATCCCTCAGC CTCCTGAGTA GCTGGGATTA 1560
CAGGCACCTG CCACCACGCC TGGCTAATTT TTGTATGTAT GTATGTATGT ATGTATGTAT 1620
TTTATTTGAG GTGGAGTCTC ACTCTGTCAC CCAGGCTTAA GTGTGGTGGC ACGATCTTGG 1680
CTCGCTGCAA CCTCCACCTC CCAGGTTCAA GTGATTCTCC TGCCTCAGCC TCCCAAGTAG 1740
CTGGGATTAC AGGCACGCAC CACCATGCCC GGCTAATTTT TTGTATTTTT AGTAGAGACA 1800
GGGTTTCACC ATCATGGCCA AGCTGGTTTC AAACTCCTGA CCTCAAGTGA TCCGCCCACC 1860
TCGGCCTCCC AAAGTGCTAG GATTACAGGT GTGAGCCACT GCGCCCGGCC TAATTTTTGT 1920
ATTTTTAGTA GAGATGGGGT TTCACCATCT TGGCCAGGCT GGTCTTGAAC TCTTGACCTT 1980
GTGATCCACC CGCCTCAGCC TCCCAAAGTG CTGGGATTAC AGGCGTGAGC CACTGCGCCT 2040
GGCTTAATTT TGCACTTTTT TAGTAGAGAC GGGGTTTCAC CATGCTGATC AGGCTAGTCA 2100
TGAACTCCTG ACCTCAAGTG ATCCACCCAC CTTAGCCTCC CAAAGTGCTG GGATTACAGC 2160
TGTGAGCCAC CGCGCCTGGT CGAAGGAGAC ATTTTCACAT TGGCTGTAAC AGGAGTGGAA 2220
CCAGAGCTGG AAGATGGACA GGAAGTAACT GAGTGAAACC AGGAGAGCAA GGCTGGAGAG 2280
AGTGGGCATG AACCAATGAG CAAGTGTTGG GTTGTGTTTT GTTTCCTTTT AGTTAATTAA 2340
TTTAATTTTT TGAGATGGAG TTTCACTCTT GTCGCCCAGG CTGGAGTGCA ATGGTGTGAT 2400
CTTGGCTGAC TATAACCTCT 2420