Tag | Content |
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EnhancerAtlas ID | HS161-10251 |
Organism | Homo sapiens |
Tissue/cell | PC3 |
Coordinate | chr20:62164040-62164900 |
Target genes | Number: 28 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr20:62164413-62164434 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 |
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| Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
SE_23268 | chr20:62164712-62171323 | Colon_Crypt_1 | SE_24714 | chr20:62164593-62175178 | Colon_Crypt_3 | SE_26873 | chr20:62164695-62170798 | Esophagus | SE_35020 | chr20:62164578-62167237 | HeLa | SE_50963 | chr20:62164727-62167173 | Sigmoid_Colon |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 62164130 | 62164195 | chr20 | 62164297 | 62164375 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I063533 | chr20 | 62164878 | 62167154 |
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Enhancer Sequence | CTGCGGGGAC GGGTGGCCTC GGTGGATGCA GCCCCTGACC CCCCAGGCCC CAAGGAAGAG 60 GCCAAGGCCC TGCCCCCACA CACAGCAGCC ATCACACCCA GCAGCTGTGC AGGACACACA 120 GACCTCCTGC CCCCGACAGG GCACCTGGCT CCCGAGGCCA CGAAATGGCA GATGCAGCCG 180 GCCCCACAGG GCCCCAGCCT GGCGTACCCA CGGGGCTGTG GTGGCCACCC GATTTCTTCC 240 TGTGCCCGGC CCAGACCTCT GACATAGAGG CCAGACCTCT GCTGGGGCCC AGACGGGTTC 300 CAGGGAAGTT TTACCCATTT CCAGTGATCT ATTTTAATGG CTTTCCATTA CGTCAAGGAT 360 TTTAAATTTT CTTTCTTTCT TTCTTTTTTT TTTTTCCCAA GACGGGGTCT TGCTCTGTCG 420 CCCAGGCTGG AGTGCAATGG CGCGATCTCA GCTCACTGCA ATCTCCGCCT CCTGGGTTGA 480 AGCGATTCTC CTGCCTCAGC CTCCCGAGTA GCTGGGACTA CAGGCACATG CCTCCACACT 540 CGGCTAATTT TTGTATTTTT AGTAGAGACG TGGTTTCCCC ATGTTGGCCA GGCTGGTCTC 600 AAACTCCTGA CCTCGTGATC CGCCCACCTT GGCTTCCCAA AGTGTGGGGA TTACAGATGT 660 GAGCCACCGT GCCCGGCCTA AAATTTTCTT TTATAATAAA TGTATTTAGG TAAAAACATA 720 GGTGCAATTG AAAGGGAACC ACTCTCGCAT GGACGCTGTG GGTGCTGCTT GGGGCTCGAG 780 GCCAGAGGTC CCTGTTGGCG GGGTGGGAGG GTGGCCCAGG GCAGGCACGG GGCCACACAG 840 AGCCCTGATC GGGGCCCACT 860
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