EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-08439

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr19:55592860-55593030

Target genes

Number: 25
Name	Ensembl ID

CTC	ENSG00000243494
GP6	ENSG00000088053
RDH13	ENSG00000160439
PPP1R12C	ENSG00000125503
TNNT1	ENSG00000105048
PPP6R1	ENSG00000105063
HSPBP1	ENSG00000133265
BRSK1	ENSG00000160469
SUV420H2	ENSG00000133247
COX6B2	ENSG00000160471
FAM71E2	ENSG00000180043
IL11	ENSG00000095752
TMEM190	ENSG00000160472
TMEM238	ENSG00000233493
RPL28	ENSG00000108107
UBE2S	ENSG00000108106
ISOC2	ENSG00000063241
ZNF628	ENSG00000197483
NAT14	ENSG00000090971
ZNF579	ENSG00000218891
ZNF865	ENSG00000261221
ZNF580	ENSG00000213015
ZNF581	ENSG00000171425
U2AF2	ENSG00000063244
EPN1	ENSG00000063245

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr19:55592994-55593005	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr19:55592995-55593005	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr19:55592993-55593008	CGGGGGCGGGGCTTG	-	6.23
SP4	MA0685.1	chr19:55592991-55593008	GTCGGGGGCGGGGCTTG	-	6.18

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_25292

chr19:55590954-55594053

Colon_Crypt_3

Enhancer Sequence

GTGAGCCGCT AAGGAAGGGG TCTGGGGGCA GGGCCAGGCG ACTGGAGGCG GGGCTAGGGC 60
GTGGAAGGGC GGGGCCGGCT GCGGGACGGG CGTTCTCTGG TCAGACTTCT GCGTTATGGA 120
AGAGGGGCTG GGTCGGGGGC GGGGCTTGGT TGTGGGGCGT GGCCAGGTGT 170