Tag | Content |
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EnhancerAtlas ID | HS161-08042 |
Organism | Homo sapiens |
Tissue/cell | PC3 |
Coordinate | chr19:38740150-38741870 |
Target genes | Number: 18 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:38740312-38740333 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | RORA(var.2) | MA0072.1 | chr19:38740609-38740623 | CAAAATTAGGTCAG | + | 6.31 | RREB1 | MA0073.1 | chr19:38741629-38741649 | GGGATGGGGGTGGGGTGGGG | - | 7.6 |
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| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_01689 | chr19:38740931-38747520 | Aorta | SE_05719 | chr19:38740660-38747663 | Brain_Cingulate_Gyrus | SE_06505 | chr19:38740590-38747917 | Brain_Hippocampus_Middle | SE_07180 | chr19:38740889-38747836 | Brain_Hippocampus_Middle_150 | SE_08496 | chr19:38740686-38747316 | Brain_Inferior_Temporal_Lobe | SE_25091 | chr19:38741524-38742381 | Colon_Crypt_3 | SE_26813 | chr19:38740945-38745091 | Esophagus | SE_28041 | chr19:38740215-38744553 | Fetal_Intestine | SE_28992 | chr19:38740170-38744794 | Fetal_Intestine_Large | SE_31775 | chr19:38741211-38744981 | Gastric | SE_42903 | chr19:38740948-38745109 | Lung | SE_50478 | chr19:38740872-38745107 | Sigmoid_Colon | SE_52743 | chr19:38740952-38744999 | Small_Intestine | SE_53909 | chr19:38740815-38745113 | Spleen | SE_55044 | chr19:38740872-38747517 | Stomach_Smooth_Muscle |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I038249 | chr19 | 38740295 | 38745432 |
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Enhancer Sequence | AATACAAAAA ATTAGCCGGG CATGGTGGCG CATGTCTGTA ATCTCAGCTA CTCAGGAGGC 60 TGAGGCAGGA GAATCGCTTG AACCCAGGAG GCAGAGGTTA CAGTGAGCCG AGATCGCACC 120 ATTGCACTCC AGCCTGGGCA ACAAGAGCAA AACTTCATCT TAAAAAAAAA AAAGAAAGAA 180 AGAAAGAAAA AAAAGACAAT GTTGAAATAG AGGGCTGGGT GTGGTGGGTG AATTGCTTGA 240 GCCCAGAAGT CCAAGACCAG TCTGGACAAC ATAAGGAGAC CTTGTCTCTA CAAAAAAGTA 300 AAAAAATAGC CAGCCATGAT GGCTCACACC TGTAATCCCA GCATTTTGGG ATGCCAAGTT 360 AGGAGGATTT ATTGAGCCCA GGAGGTCAAG GCTACAGTGA GCTATGATTG TACCACTGCA 420 CTCCAGCCTG GGTGACAAAG TGAGGCTCTG TCTCTAAAAC AAAATTAGGT CAGGCACAGT 480 GGCTCACCCC TGTCATTGCA GCACTTTGGG AGGCCGAGAC AGGCTGATAA TTTGAGCCCA 540 AGAGTTTAAG ACCAGACCGG ACAATACGGC AAGATCCTGT TTCTTAAAAA AAAAAAAAAA 600 AAAAAAAAAA AAAAAAAAAA AGCCAGGCAT GGTGGTGCAT GCCTGTAGTC CCAGCTACTT 660 GGGAGGCTGA ACTGAGAGGA TCACCTGAGC CTGAGGAGGT CAAGGCTGCA GTGAGCCAAG 720 ATTGCACCAC TGGACTCCAG CCTGGGTGAC AGAATGAGAC CCTGTCTCAA AAAACAAAAT 780 AATTTTTTTT AAACAATAAA ATTAAAAAAC ATAAAATAAA ATTTTTTTTA AAAAGCCACT 840 ACCCACTTCT GATGGCCCAG CTGCTCCCTT GGGACCCTCC AGGCCTCTCC ATGCCCCAGC 900 ATGAAAGGAT TAACCTGGGT TCAATAGGGG GCTTCCCTGA TCCAGCTCTG GGGGCCATTG 960 TCCTTCCTGA CTGGTGGATG GCCCTGGCAA TATTTGGTGT TTTCCCTGGC TCTGCCCCAA 1020 TATCAATCCC TCCACCCATA AGTTCAGAGT CCTCAGAGAA GGGTATCCAT TTCACAGAAC 1080 TCCTATGCAT CCTTCAAAGC CCACCTTAAT GCCACTTCCT TCAGGAGGCC CTCCCAGATT 1140 TCTTCACCAC CCCCAGAGTG AATAGCTCCC TCCCCTCTGC CAAGCTCCCA GGTATCTTGA 1200 GCCATTCAGC ACACTTTGTT CTGATTCTCA CACTCAGGCC CTTCTCCCCC CATAGTGTGT 1260 GAGCACCTTG ATGCCAGAGA CCATCTTCCT CTCATCTTTG CAGCCTCAGT ACCAAGGGCC 1320 ATTATAAGCA CAGCGCAGAT TTCATGGAGT GGCTGAATGA TTTGTTTGCT GTGTGATCAC 1380 CTGTACTGAG TCAATATCGG TCACCTTTGG TCATGAGCAT GCCCCTTGAC CCAGATTCCT 1440 GCAGGAGCCT GCATATAGGG GCCCTGCTTG CTGGGACTGG GGATGGGGGT GGGGTGGGGA 1500 GTTCAAGGGA AGGCAAGGTC TAGGATATAA ATCCCAAGGG CGTGGGCTCA GCAGGGCCCG 1560 TTCTCATGCT TTCTGGCCCG GGAGGAGTGA TTCTCCATCT GGCAGGCCCA GCTGCAGTGC 1620 TGGGACAGGG ACATGAGCAG AGGCCACAGG AGGAGAGAGG GAGGTTGTGG GGGGAGCTCG 1680 GGGAAGCCCA TGGTAACCCG GGGGGAGGAA AAACAGCCAC 1720
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