| Tag | Content |
|---|
EnhancerAtlas ID | HS161-07961 |
Organism | Homo sapiens |
Tissue/cell | PC3 |
Coordinate | chr19:19701230-19703170 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:19701269-19701290 | GTTTTCTTTCTTTTTTTTTTT | + | 6.33 | | JUN(var.2) | MA0489.1 | chr19:19702034-19702048 | GAGAGGTGACTCAT | + | 6.35 | | LMX1B | MA0703.2 | chr19:19701796-19701807 | GTTTTAATTAA | + | 6.14 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_12109 | chr19:19700241-19703035 | CD3 | | SE_18839 | chr19:19700276-19704898 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19648 | chr19:19700122-19703992 | CD4p_CD25-_Il17p_PMAstim_Th17 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 19701562 | 19702782 | | chr19 | 19701908 | 19702346 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I019589 | chr19 | 19700502 | 19703700 |
|
Enhancer Sequence | AATAATACTC CATTGCATGG ATGGACCACG TTTTGTTTTG TTTTCTTTCT TTTTTTTTTT 60
TTTTTGAGAG AGAGTCTTGC TCTGTCACCT AGGCTGGAGT ACAGTGGCGT GATCTCCGCT 120
CACTGCAACC TCCGCCTCCC AGGTGCAAGT GATTCTCGCG CCTCAGCCTC CCGATTAGCT 180
GGGATTACAG GCATATGCCA CCACGCCCAG CTAATTTTTA TATTTTTAGT AGAGACGGGG 240
TTTCACCATG TTGGCCAGGC TGGTCTCGAA CCCCTGACCT CAAATGATCC CCCCACCTTG 300
GCCTCCCAAA GTGCTGGAAT TACAGGTGTG AGCCATGGCG CCTGGACACA CATTTTGTTT 360
TTCTAGTTAT CATGGACATC AGGTTGTTTT CAGATTCCTT AATCTGTATA TTTATATACA 420
ATGATCCACT TCTCTGTCCA ACAGACACTT TGGCAATGAT AGGATGTTCT AGACCTTTCT 480
ATTATAGGAG GCACCAGCCC TGTGTGGCTG CTGAGACTTG AAATGTGGCT GGTGTGGCTG 540
AGGAATGCAC TGGTTAATTG CATTTGGTTT TAATTAATTC AAATGTAAAC AGCCCTGCGT 600
TGAGTATCTG GAGCCACCCA GCTGATGAGA CTCAGGGGCT CAATTTGTGA GTTACCCTGA 660
GACTGAGGGG AGGAAAGGAT ACTCCAATCA ACCTGGAGAA TAAGTCCCCC AGCTGCCGGG 720
GTCTACTCCC ACAAGAACCC TAAAGAAATG TACATGGGAC TCAGCCCCAG GGTACAGCTA 780
ATTAGAAAAA GGATCTCAGT TCCAGAGAGG TGACTCATAG GCCTCAGGGT GACTGCTAGG 840
ACCCAGGAAA GCCCCATGAG CACCATGACA CCCCAGCTTC CTGGCTGAAT TTACAGAACC 900
CGATTCTGTA ATTGCAACAG ATCCGACCAG CTGACGAGGA AGGGAAAGAA TGAGAATGGC 960
TTATGCCTGC CAACTACTAG CAAGGCCAAT CATTAGTCAG GAAGACAAAA AGGCATTCCC 1020
TGATGTTATG CATTATTTAC ATTTACTCCT CTGAATGGGG CTCTGTGCGT TCCTACAGCA 1080
CAGCAAGGGT TCCTGCAGCA CAACAGCCCT GGCTGAGAAA CTTCTTGTTC CCCAGAGACA 1140
CAGTCACAGG GTGGAGAAGG CAAAGCAGGC CCCTTCTCAA GAACGGCCCA GGATGGGATG 1200
GCCGAGTGGG TCTGCAAGGG GCCTCTGGGG CTCAGCACAC CGCCTCGGAG CTGCCTACCC 1260
ACTCGAGATC TGAGATCCGA AGCTTTTCAC ACAAGCTGTC ACTCATGCTC ATGTGGAGGT 1320
AAAGCCTGAC ACATTCCAAC GTGCCAGGCT GTCCCTGCTC TGGTGCCAAA CACCACTGTG 1380
TGAATTCAGG CCACGCCTCA GTCCTCACTG GGAACATCAA TGTGACAAAC CTTATTTTTT 1440
ATTTTTATAT TTTTTTAGAG GCAGAGTCTC ACTTTGTCGC CCAAGCTGGG GTGCAGTGGT 1500
GTGATCTCAG CTCACTGCAA ACCTCACATC CCAGGTTCAA GTGATTCTTC TGCCTCAGCC 1560
TCCCGTGTAG CTAGGATTAT AGGCACCCGC CACCATGCCC AGCTAGTTTT TGTATTTTTA 1620
GTAGAGATGG GTGGGTGAGG GAGGTGGGGG GGTGGTTCAC CATATTGGCC AGGCTGGTCT 1680
CGAACTCCTG ACCTCAGGTG ATCCGTCTGC CTCAGCCTCC CAAAGTGCTG GGATTATAGG 1740
CGTGAGCCAC TGTACCTGGC CAACGTGACA CATCTTAAAT CCAACGCTTT CGAATTCTGC 1800
AACATACCTA GTCCCAGGGT CTCAGCAAAG GGACTGTGGC CCGTATCTGG TTCTCCCAGC 1860
TAAATTCAAA GCTCTGCAAC TAATCAGGGT TTATTTTGTT CTCAGAACAG CTCCTCTAGA 1920
CACCGAGGAG GACAGCTGTT 1940
|
