| Tag | Content |
|---|
EnhancerAtlas ID | HS161-07960 |
Organism | Homo sapiens |
Tissue/cell | PC3 |
Coordinate | chr19:19513480-19514760 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:19513507-19513528 | AAAGAAAAAAAGAAAGTACAG | - | 6.67 | | LMX1B | MA0703.2 | chr19:19514496-19514507 | TTAATTAAATT | - | 6.32 | | SOX10 | MA0442.2 | chr19:19513898-19513909 | GTCTTTGTTTT | - | 6.14 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_09215 | chr19:19512195-19519208 | CD14 | | SE_18475 | chr19:19514123-19519049 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_32412 | chr19:19513936-19514553 | Gastric | | SE_40222 | chr19:19513599-19515021 | K562 | | SE_43282 | chr19:19513775-19514666 | Lung |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 19514283 | 19514636 | | chr19 | 19513804 | 19514729 |
|
Enhancer Sequence | AGCAAGACTC TGTCTCATTA AAAAAAAAAA GAAAAAAAGA AAGTACAGTA TTAATTAACA 60
ACGGCTATCA CTAAGGGTTT TTTTTTTTTG TTTTTGTTTT TTTGATTTTT TTTTTTTTTT 120
GAGATGGATT CTGGCTCTGT CGGCCAGGCT GTAGCGTAAT AGCGCGATCT TGGCTCACTG 180
CAACCTCCGC CTCTTGGGTT CAGCGATTCT CCTGCCTCAG TCTTCTAAGT AGCTGGGATT 240
ACAGGCGTGC ACCACCATGT CTGGCTAATT TTTGTATTTT TAGTAGAGAT GAGGTTTCAC 300
TGTGTTGACC ACGATGGTCT GGAACTCCTG ACCTCAGGTG ATCCACATGC CTCGGCCTCC 360
CAAAGTTCTG GGATTACAGA CGTGAGCCAC TGTGCCCTGC CAGCACTAAG TATTGACTGT 420
CTTTGTTTTC AGATCAGAGA GAAAACTTTT AGAAAACATG GTTCTAGCCC TAGTTGTTTC 480
TTAATTAGAG TTTCTTCAGC TTTAGTATGG CATCTGAAGG TGATTGCATC ATATTTCATA 540
ATCACCCAGC TGAACTATTT GCTGTTTAGT CCAGCACTGG GCACTGAGGC TAAAAGATCT 600
TTAATCCAAA CAGCCTCAGC ATTCACCCAA CCTGAGCCTA TGGGACCCCA AGCAGATCTG 660
GATTCACTGT CACTTACCAT CTACCCATCT GACCCTGTCT TCCTATGACA GACAGAAATA 720
AACCCTGTAG CTATTTCACC CCACCTACAT ACCCTGCACC CCTCCTACTC CCCGTCCGAC 780
TTTCCTGGCT GAGAAGTTGG CACTGCCCTC TGGAGCAGGC CCTGTCACCA GTGCACCCCT 840
CACTCCACAG GGGTGTGTCA TTAATGTGTT GCAGTTGATG CCTCCCTCTT AAAAAAAAAA 900
AGGGGTGGTT GTCACCCTGG TGACTCACAC AGGGCTTGCT GGCTCAAACT CTGGAATCTG 960
TATATCTGTC TCAAGTGTCA GGTCTCCCAC CTGACCACAC TTTGCTCTGT TTGTAGTTAA 1020
TTAAATTGAC ATTAATCAAG ACCCAGGTGA GGAGCAGTGA GGTAATAGTT TGCTTGTATT 1080
GCTTTAATAT ACATCATCTG ATTAATGATC GTAGCATGAA GCAGTTCTTA AAATATACAG 1140
CCACCATGTT AGGGTGAAAA ACCTGGATGG TTGCCCTAAA CCAACCTTGC GCTTGGGATC 1200
AGGGAGCTCT TTGAATTCCT ATACCGAGTC ACCTGTTTGA GAATAAGACT GTTTTGTTTG 1260
TTTGGTTTCT GAATTTGAAC 1280
|
