Tag | Content |
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EnhancerAtlas ID | HS161-07922 |
Organism | Homo sapiens |
Tissue/cell | PC3 |
Coordinate | chr19:18130420-18133920 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | Nr2f6(var.2) | MA0728.1 | chr19:18133768-18133783 | TGAACTCCTGACCTC | - | 6.22 | Nr2f6(var.2) | MA0728.1 | chr19:18130678-18130693 | TGAACTTCTGACCTC | - | 6.38 | RARA | MA0729.1 | chr19:18130675-18130693 | TCTTGAACTTCTGACCTC | - | 6.88 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 | RREB1 | MA0073.1 | chr19:18131314-18131334 | GGGGTGGGGGTGGGGGTGGG | - | 6.27 | RREB1 | MA0073.1 | chr19:18131320-18131340 | GGGGTGGGGGTGGGAGGGGG | - | 7.19 | SP3 | MA0746.2 | chr19:18133699-18133712 | CACCACGCCCACC | + | 6.48 | SP8 | MA0747.1 | chr19:18133700-18133712 | ACCACGCCCACC | + | 6.32 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18130671-18131169 | Brain_Angular_Gyrus | SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 6 | Chromosome | Start | End |
chr19 | 18131787 | 18132922 | chr19 | 18133045 | 18133309 | chr19 | 18131991 | 18132570 | chr19 | 18131070 | 18131394 | chr19 | 18130949 | 18131445 | chr19 | 18131379 | 18133644 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | CTGAGATTAC AGGCATGAGC CACCACGCCC GGCCTTTTTC TTTTTTTTTT CTTTTCTTTT 60 TTTTTTTGAG ACAGCATTGT CCAAGCTGGA GTGGAAAGCC TCGATCTCGG CTCACTGCAA 120 ACTCTGCCAC CCGAGTTCAA GCAATTCTCA TGCCTTGGCC TCCTGACTAG CTGGGATTAC 180 AGGCACCCAT CACCACGCCC AGCTAATTTT TGTATTTTTA GTAGAGACAG GGTTTCACCA 240 TGTTGCCCAG GCTGGTCTTG AACTTCTGAC CTCAGGTGAT CTGCCCATCT TGGCCTCCCA 300 AAGTGCTGGG ATTACAGGCG TGAGCCACCA TGCCCAGCTC AGATGAAGAT TCTGATGGGG 360 GTGGAGGTGT CATCCCTTGC ACTTGCTCCC AAGACCTCCT AGAGTCAGAC GTGTCCCCCA 420 TGCAGAGTCA AATGCTAGGT CTCTATCTCT CAGTGTCTCT GTCTGTTTCA TTCTGACTCT 480 CACCATCTTT TCTTTCCCAT CTCTGTCTCT CTCTCAATAT CTGTCTTGCT TACTGTCTCT 540 GTCTCTGTCT CTCAGTCTTA TTGCCTCTGT ACTTCTGTCT CTTTCTCCCT GTCTCTGTCT 600 CCCTCTGCCT CTGATTCTCT CACTATCTCT CTTGGCTACC ATCTCTCTGT CTCTTTGGGT 660 CCCTGACTCT CTCACCATCT CTGCCTCCTG CCCTGGCCCG GCCAGCTGGG GGACAAGGGG 720 TGACAAGCAG TCAGGGCGCC CGCTGCTTGT TTTCCCACCC ACGCTGGCAG GGAGCCCAGC 780 CCAGCCGGGC CACTGTTCAG GAATCCTCCA GCCTCCCCGC TCCAGCCACC AGGCGCGGCC 840 ACCGCCAGCC TCTCCTCCCA GCACATTCTG TCCCAAGCAA AGAGCGCCAG AGATGGGGTG 900 GGGGTGGGGG TGGGAGGGGG ACGCATTCCT GCTGAGCTCC AGTTACAGGA CAGCTTGTCC 960 TGGTGGCCCC ACCAGCACAA CCTCCTGATG GCTCCCCATC CTGCTGTGGG GTTAGACCTT 1020 CCTGAATGAA GCCAAAGCCC CTCTGCCAGT TCGTGCCCAC CTCAGGGCCT TTGCACCAGC 1080 CATACCTTCC ACCTGGCACT CTGTCTCCCT AGATCTCCCC AAGACCTCCT CCGCCTGCAC 1140 ATCTGAGACC TCACATCACC TTCTCAGCAA GTCCCCTCTG TCCCTAGGCC CGGGCACCCC 1200 AAATTCCCCT CCTGCTGCCC CAGTGCATTT AATTTCCTGG TCCTCCCCAT GTCCCTGGGG 1260 TTACATATTC ACTTGTTTGT TGATGTGGTG TCTATTACAC CAGGTCCCCA CTGTGTCCCA 1320 GCACCCTGAA CACACAGTAG GTGGCTTAGT GAAGGTTTTT ACAATTGACA TCTATTCCTC 1380 CCAAAGCTCA GCCCGCCCAG GCTCATCCAT GTGGATCCAC AGTTCTGACC ACCCCACCTC 1440 TGCCTCACCC TGCCTCCGCC ACCCCTGCAC CCTAATGCAG CAGGATTTCC CAAGCCCCCC 1500 TGCCTTGGCC CAGGGAGTTA TCTCCACCAG ATCCACCTTT CTGAGCGAGG AGCTGGGTGC 1560 ATTGAGGGGC AGGGGCGGCT GGAGTTCAGA TGCACCTTTT GAGCGAGGGG CTGGGCCTCT 1620 CTGTCGCTGG GCTCCAGGCA CAGGGCAGTC ATGATGTACA CACACACGTG CAAACACACA 1680 CGCACACACA TAAGCCTGTC AGCAACATAG AAACACCAGC CAGTGAACTC GGGCACAAGC 1740 AGCCGGGCAC AGAGTGTTCA CCAGGTGCTC ACATGTGGAG TACCCCAACT CCTAGGAGGA 1800 TGCGGTTATG GCCTGGATCC TACAGGTGGG GCCCAGACAT GGGCTTTGAA CCCACGCCAG 1860 GGTATGCACA AACCTATCCA AACACACGCG TGTCTGCCCT AGCTTCCCTC ACCCGGGAGT 1920 CACCCCCCCA CCCCCCACCT TGTTTTTGAT GTTCAGGAAA GTCCCCAGAA AGCACTGGGC 1980 CCGGGCAAGG GGCCAGGAGG AAATGGTGAC TCAGCCGGTG GCCATCAGTG CCTGCCACGC 2040 TGGGCTGGGT GGACTGCGCG GCCCGATCTG GGAGGATCCA CAGAAAACAA CAATAAAAGA 2100 TGAGGGCGTG GGTGCGGGGT AAAAAGGACT CAGCCCAAGA ATGATCAGAG AGGGGATGGA 2160 TCCCCCTGTG CTCCAACACT TCAACCCTGC TGGGCCTGAT TGACAAGTGG GGAAACTGAG 2220 ACACAGGGAA CAAGTGACTT CGCCAAGGCC CACCAGCCAA GATGGTACAG GCAAGGGGAT 2280 CCCTAAGTCC TTAACACAGG GGTCTGGAGG AATGTCTACC TGCCCTGCCC TTTTTTTTTT 2340 TTTTTTTTTT GGAGACAGGG TCTCACTCTG TCCGTCAGGC TGGAATGCAG TGGCATGATC 2400 TCAGCTGACT GCAATCTCCG CCTCCTGCCT CAGCCTCCCA AGTAGCTGGG ATTACCGGCG 2460 CCTGTCCCTA TGCCCAGGTA ATTTTTGTAT TTTTAGTAGA GATGGGGTTT CACCATGTTG 2520 GCCAGGCTGG TCTCAAACTC CTGACCTCAG GTGATCTGCC CACCTCGGCC TGCCAAAGTG 2580 CTGGGATTAC AGGCGTGAGC CACAGTGCCC GGCTCCCTGC CCCACTTTCT GAGACCCAGA 2640 TCCACTTCCT GGTTTCCTGT GTGGTCATGT GACCACACTT GGCCAATTGG AGCCTTTTGT 2700 TATCACAGGC ACAGGGATTG GGTCAGGGCT GGGCACGTGA TCCTGCCTGA GCCAATCATG 2760 CTACGAGTTT GGAGACTCCC TGGAAGAAGG CCTAGAAGTA AGGAAAACCA TCTTGGACGC 2820 ATGATGATGG CAGTGGATCA GAGTCCCAAG GACACTGGTG AAGATCAGAG CAGGACTCAC 2880 ACAACCTCAG ATCCCTGTGG AGTCAGGGTG GAACCAGAGG GAAGGCTGAA GGCTGGAGGG 2940 TCCTGAGAGG CCTTGCAGAA AGAGAGGACA TTGGAGCTGG GGCTTTGATG GATGAAGAGG 3000 AACTAGGGAA AGGCATTTCA AGCAGAGGGA ACAGCCTGTG CAACCACAGC AGGCAGGTGG 3060 GAGCTAGGCG TGTCCTCAGC CACCCCAGTG GCCCCATGGG GCTGGAGCAT AGAGAGGCAT 3120 CTGCAAATGT GTTTATTTGT TTATTGAGAC GGAGTTTTGC TCTTGTTGCC CAGGCTGGAG 3180 TGCAGTGGCG CAATCTTGGC TCACTGCAAC CTCCGCCTCC CGGGTTCAAG CGATTCTCCT 3240 GTCTCAGTCT CCTGAGTAGC TGGGATTACA GGCGCACGCC ACCACGCCCA CCTAATTTTT 3300 TGTATTTTTA GTAGAGACGG GGTTTCACCA TGTTGGCCAA GCTGATCTTG AACTCCTGAC 3360 CTCAGGTGAT CCACCCGCCT TGGCCTCCCA AAGTGCTGGG ATTACAGGCG TGAGCCACTG 3420 CGCGTGACTA TTTATTTATT TTTTTAGATG GAGTCTCACT CTATTGCCCA GGCTAGAGTG 3480 CAGTGGCACG ATCTTGGCTC 3500
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