EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-01062

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:150600600-150601530

Target genes

Number: 22
Name	Ensembl ID

VPS45	ENSG00000136631
ANP32E	ENSG00000143401
APH1A	ENSG00000117362
C1orf51	ENSG00000159208
MRPS21	ENSG00000187145
PRPF3	ENSG00000117360
RPRD2	ENSG00000163125
TARS2	ENSG00000143374
ECM1	ENSG00000143369
LINC00568	ENSG00000228126
ADAMTSL4	ENSG00000143382
AL356356.1	ENSG00000225996
MCL1	ENSG00000143384
ENSA	ENSG00000143420
GOLPH3L	ENSG00000143457
CTSS	ENSG00000163131
CTSK	ENSG00000143387
ARNT	ENSG00000143437
SETDB1	ENSG00000143379
RP11	ENSG00000259357
CERS2	ENSG00000143418
PRUNE	ENSG00000143363

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MNX1	MA0707.1	chr1:150601285-150601295	TTTAATTACC	-	6.02
ONECUT1	MA0679.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.73
ONECUT2	MA0756.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.51
ONECUT3	MA0757.1	chr1:150600918-150600932	AAAAAATCAATACC	+	6.79

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_14726	chr1:150599729-150603822	CD4_Memory_Primary_7pool
SE_18894	chr1:150599212-150603232	CD4p_CD25-_Il17-_PMAstim_Th
SE_19754	chr1:150599600-150602962	CD4p_CD25-_Il17p_PMAstim_Th17
SE_64527	chr1:150594020-150603142	NHEK

Enhancer Sequence

CGTCTCTACA ACAACAAAAA ATAGTTTGCT AAATGTTTCC TCCTTATTTT TTTCTTTCTT 60
TTTTAAAATT GCTACACGAC AAAGCAGTTC CTTCTTTATT CAAGGTCTAA GCCACCTGTT 120
AGGTCTCCCT GTGGAGGCGG CTAGCTATGT GGCCTTCTCC AAAGATCTCC ACCTGAGTAA 180
TGGCACAGCC TTGCTTCAAC ATTTCCACAA ATATTATGGT AGCAAGCTGA TAAACAGAGA 240
GGAAAATGAT ACTGTTTTTA ACCTCAGGAA AACAAAGATA CAGTAGGCTC ACTAGTATTT 300
ACCCACCAGT TTTCATCAAA AAAATCAATA CCTACCCTGG TGGTGCAGGG ACTCTCACTA 360
CTGTAGTCAA TCTCTTTTTT TTTTTTTTGT GGTCCCTGCT GCCCTTTAGT GACTTTTTGA 420
AAAGATATGA AGTCAACGTA TGACTCTTTT TAGTGGAATT ATATTCCTTT CTCTTGGAAA 480
TTACGCATAG ATATAACACC AAGTGTATTT AATGAGTACC TGAACCCAGT ACTAAATTTT 540
AAAAGTCAAA TACAAACCCC AATAAGGGGT TTATTTGGCG TTAGTGTTTC CATCACGGAA 600
TCGCAGGTGC ACTAAGTCCC TGCCTTGGAA GTCTAGGGGA AGAGAGAAGT GTCTTTCTCA 660
CGACCCTGTC GGCGTCTTTT CCAAGTTTAA TTACCATGAT TCTGTTTGGA ACTCTAGCCC 720
TCTTCAATAT TGCTGGGTCC TCACTGAAGG TGAGCAATAG ACCATCCTTA GCTACTAAAA 780
TAGGTCTCTT GAGAAAGTTG CCGCCTTAAA CTAGCCATTA TAATAACTAC ACTTCTCCCC 840
TCCCCCAATA CTGGTTTTTT TTTAAACGTC TTTACCTCGA CCCCTATCTT TGCGGATTGA 900
GGCTGCGGGC CCCAGCCCGG TTGCTGGGTC 930