| Tag | Content |
|---|
EnhancerAtlas ID | HS161-00646 |
Organism | Homo sapiens |
Tissue/cell | PC3 |
Coordinate | chr1:43813770-43814510 |
Target genes | | Number: 19 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr1:43813971-43813982 | TTTTATTGCTT | - | 6.32 | | mix-a | MA0621.1 | chr1:43813904-43813915 | ACTAATTAATT | - | 6.62 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03360 | chr1:43813758-43814605 | Brain_Angular_Gyrus | | SE_23264 | chr1:43813602-43815872 | Colon_Crypt_1 | | SE_23848 | chr1:43813941-43815771 | Colon_Crypt_2 | | SE_24762 | chr1:43813843-43816295 | Colon_Crypt_3 | | SE_31866 | chr1:43813587-43816440 | Gastric | | SE_34471 | chr1:43813503-43816544 | HCT-116 | | SE_35010 | chr1:43813554-43816263 | HeLa | | SE_57439 | chr1:43813955-43815756 | VACO_503 | | SE_65856 | chr1:43813657-43816001 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I043347 | chr1 | 43813613 | 43816407 |
|
Enhancer Sequence | CAAATTCCTA CCAGGATTGC CTTAGACTCA TCTGTGACCA TCCAGCCGTG TCATCCATGC 60
TTTTAGCACA CTAAACTACT CTGTGGCACA AAACCAAGCA TTAAATGCTT CTCTGGACTT 120
CCGTGGTGCC TTGCACTAAT TAATTGTTGT GATTATTTAC CTGTTTGGAT GTCTTTCTCA 180
TTAGATATGT AAGAGACGGT GTTTTATTGC TTTCTCCCCA GTGCCTAACC CAATGTTTGG 240
AGTATCACAC AGTTCATAAA TGTTTGCTGC CTTCCTGCTT GTACACATGA TGCTTGTACC 300
CCAGCGCCTA ACGCAAATCT GGCATCCTCT GCAGCATGAG TATTATTTGT GGCATGGTCT 360
GTGTGGCTCT GAATATATCT GTTTCTGGGG GTGTCCATCG CCCGACCTGG AGTTGTGAGA 420
ACACCCGGTA GGGTGTGCGT GTACCGGGAT CCCTGCCGAG GGTGTACCTG GGTGTTGGTG 480
TTAGGATACG TAGCTCTCTG AGGTGAGGTC TGTGTCTCAG GAGGTGGGCC TGGCACGTTT 540
CTCTCGGGCA GAGCGTGATC CCGTTAGGGA GAGGCTCTCG GTTAGGGCGC TCTATCCTGT 600
TGCTGGGAAG CGTGTTTTCT GCCGGTGGGG CTCTTTGTGG GAATCTCCGA CCGCCTGGGG 660
ATTCGGAGCT GCAGGATTTG GGTCAAACAG ACGCTGGGCT ATCGAAGCCC CGACGCCGGG 720
CCACCGCACG CTTCTTTGCT 740
|
