EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-00346

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:24150920-24151840

Target genes

Number: 19
Name	Ensembl ID

TCEA3	ENSG00000204219
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
ID3	ENSG00000117318
RPL11	ENSG00000142676
TCEB3	ENSG00000011007
RP5	ENSG00000236810
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
FUCA1	ENSG00000179163
RP11	ENSG00000229106
CNR2	ENSG00000188822
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529
IL22RA1	ENSG00000142677
IL28RA	ENSG00000185436
NIPAL3	ENSG00000001461

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA

MA0729.1

chr1:24151524-24151542

GAGGTCTGAAGTTCAATT

6.7

Enhancer Sequence

GTTGGAATTG CCATCTTCAT TTTACACATG AGCAGGTGGT GCAGGTGAAT GGCCAAGTAA 60
AGATATTAAC GTGGCTTTCT GAGAGGGACC CAGTGCCAGG AGTGTATTTT TCCCTCTATA 120
CAGTTATAAC TCCTTCTCAA CTCCCTAAGG TAAAAATACC ACCACCGACT GATCACTTAT 180
TAGGAGCCAG AACACTGCCA GATGTGTTAC TTACATTTTC TCTAATTTCC AAAACAACCC 240
CAAGGGAATG TTGTCCGTTT TACAGACGAA AGAGCTGAGG TTTAGAGAAA GTAAATAACT 300
ATGTCATTAA GTCTAGAAAG TGGCAGAACT ATTGGGACAC CCTAGCTTCA GCTTTTATTT 360
TTTCTGCTCC ATACAGCTAC GTCTCCCACA CTTTTTCTGC GCTGAGAATG GGAGAGGGGA 420
AAACATCAGG ATCGAACAGG ATCAAAGTGC AATTCCAAGG GAATCACAGC TTGGCTCCAA 480
TCAACGCAAG TCCCGCTCGG TAGGCTGGGA TAGTTCCCCA AGCATCTCTA AAAGCAACAA 540
CAGTTGGAAA TGGAGACGAA GGAAATGGAA GCGTGTTCTT GATTTTCACT AATGAAGAGT 600
TGGAGAGGTC TGAAGTTCAA TTAGAGGGAG AAAGGGGCCA GGGTCATCGG AAAGGGCCCT 660
GGGCGGGGAA TCAGGGCACC TAGGATGGCG TCCCAGGTCT CCATGACCCA GACAAGTCAC 720
TCCACCTCTC CGGACCTCAG TTTTCCCATC CCCTTCAAAG GATTTGAGGG GAAAAGGGAG 780
GGTCCAGGAC TCCAACGCCC TCCCGACTCT GGCCTGAGAG CTGTCCGGCC TCGCCTCTAA 840
GAGAGCAGTC ACCACGGGCC AAGCCCCCAA CCCTGACAGT CAGAGTGCCT GCAGGGCCGC 900
CGCCTCGGCG GCTCGGGGCA 920