EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-00124

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:8197090-8198930

Target genes

Number: 8
Name	Ensembl ID

VAMP3	ENSG00000049245
PER3	ENSG00000049246
RP3	ENSG00000236266
UTS2	ENSG00000049247
TNFRSF9	ENSG00000049249
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
CTA	ENSG00000232848

dbSUPER

Number of super-enhancer constituents: 17
ID	Coordinate	Tissue/cell

SE_02013	chr1:8194089-8198750	Aorta
SE_26216	chr1:8197016-8198791	Duodenum_Smooth_Muscle
SE_29143	chr1:8197334-8198595	Fetal_Intestine_Large
SE_33765	chr1:8195625-8199317	HCC1954
SE_34231	chr1:8196865-8199419	HCT-116
SE_36931	chr1:8192440-8199276	HSMMtube
SE_38712	chr1:8196572-8199390	HUVEC
SE_39254	chr1:8196718-8197796	IMR90
SE_39254	chr1:8197890-8198740	IMR90
SE_47106	chr1:8190652-8200946	Panc1
SE_52130	chr1:8192885-8199222	Skeletal_Muscle_Myoblast
SE_54673	chr1:8196830-8198827	Stomach_Smooth_Muscle
SE_55699	chr1:8192532-8197359	u87
SE_55699	chr1:8197364-8199449	u87
SE_63913	chr1:8193083-8199304	HSMM
SE_67928	chr1:8192532-8197359	u87
SE_67928	chr1:8197364-8199449	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008132

chr1

8192211

8199160

Enhancer Sequence

ACCAGTTAGA GTGTAATGGA AGCAAAAGGG AATGTACTAG AAGGGTCTCT TGGACTCATC 60
CAACAGATGT GAGGTTGAGG CACTGAGTTT GAAAAGGGGC GGAAATTGGC CAGGCGCGGT 120
GACCCACACC TGTAATCCCA ACACTTTGGG AGGCCGAGGT GGGCAGATCA CGAGGTCAGG 180
AGATTGAGAC CATCCTGGCT AACATGGTGA AACTCCGTCT CTACTAAAAA AGTAAAAAAA 240
AAATTAGCTG GGCATGGTGG CGGGCACCTG TAGTACCAGC TACTCGGGAG GTTGAGGCAG 300
GAGAACGGCG TGAACCCGGG AGGCGGAGCT TGCAGGGAGC GGAGATCAGG CCACTGCACT 360
CCAGCCTGGG TGACAGAGTG AGACTCCGTC TCAAAAAAAA AAAAGAAAAA AAGGGGTGGA 420
AATCATGTAG TTCCAGAAAG CTAGCAGCTC CGCATTCTTG CTGGGAGGCA GGTGCTTGGA 480
TTTGAGATTT CATCGGATTC CCTCAAAGGG GATGAGGGAA ATTCATAAAA GGAAATTCAG 540
ATGCTCTAAG GATGGAAGAA TGGCTAGAAA GCAACTGAAA CCCAACAAAA ATCCACAGCA 600
GCAGGCAACT CAGACGAGTG TCTGTAATTT AAGTAGAAGG AGAAGCGCCA GCTTTCTTGT 660
ATCATGAAAA CGTTTACAGT TTCTGGGCTT AGAAGAAAAA AGCCCTAAAA CCTTGAGGAT 720
AAAGGAATTC ATTTTCTAAA ATTCAGTTCT ATAAACAACA CTGTGAAAGG CCAGAGGAAG 780
GTTATCAGAT GGGATATTTG TGTTTAATTT CTCAACTTAC CACAATCCAG GAGCAGATTT 840
ATAGTCATTG GTTGGGAATG TGTCAGCGAG CACCCGAGGT CAGGGAAATG TGGTCTTTTG 900
CATTTTGAAA CACAGAACTG TATGTTTCTT CAGCTGCCGA TTTACCAGCT CTCCGGAGAC 960
AATAGGCTGA GTTCATTTTG GCTGAGGGAC ACCGTGACTG ACCGATTCTC TCTGGTCGCA 1020
GAAATCACGG CTTTCCTTGT TCAGGACATC TGACCAGCAT TAGGGACTGG TGAGTCAGTC 1080
AGCTGTAAAG GATGGTTCCT CCAACTGGGG ATCTGAGAGA TCAGCAAAAA GGGATTTGGG 1140
AGGAAATGAA GTTTGTCATG CTGGGCCAGA GTGGTCATAT CATTAGAGGC AGAAAAGTGT 1200
CTGCTTCCAT TTCTGTTTGT TAAAAATAAT TAAACACCTT GGGAGTCTCA GAGAGGTGCT 1260
CAGCCCGGAG TCCTTACAGC TGTCCTCAGG TTGCCGGTCC ATAGCTGACC CCTACGGAAG 1320
CTCATGGACA CCTGAAATTC GTTTTCATTT ATAAATGTAC ACCCATAATG AATCTCTGAT 1380
GAAAGGAAAC TTAAGGAACA CTGATGACGA AAAGAAAGGC CATCGATGAG AAGAGAATAA 1440
TAAAATTTCT ACAAGTTGGC TGTAACATGA GTTTTCCCAG GCTTTTTGTT TGTTTTGTTT 1500
TGGAGACAGG GTCTTGCTCT GTCACCCAGG CTGGAGTGCA GTGGCGCATT TCTGCTCACT 1560
TGCAATCTCC ACCTTCTGGG TTCAGGTGAT CCTCCCACCT CGGCCTCCCG AGTAGCTGGG 1620
ACCGCAGGCA CATGTCACCA TGCCTGGCTA ATTTTTTGTA TTTTTTGTAG AGGTGGGGGT 1680
CTCGCCATGT TGCCCAGCTG GTCTCAAACT CCTAGACTCA AGTGATCCTC CCGCCTTGTC 1740
CTCCCAAAGT GCTGGGATTA CAGGCATGAG CCACGGTGCC TAGCCCTTCT CAGCTTTCTT 1800
AGCTCTTTCC TTCTCATCAA AATTAGACTT CTCCAGGCAA 1840