EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-00065

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:2138350-2138990

Target genes

Number: 12
Name	Ensembl ID

TMEM52	ENSG00000178821
RP11	ENSG00000226969
PRKCZ	ENSG00000067606
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911
FAM213B	ENSG00000157870

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_02224	chr1:2138180-2142703	Aorta
SE_02984	chr1:2138243-2140692	Bladder
SE_28207	chr1:2138289-2140631	Fetal_Intestine
SE_29530	chr1:2138252-2140675	Fetal_Intestine_Large
SE_46689	chr1:2138255-2140692	Ovary
SE_47622	chr1:2138814-2139208	Pancreas
SE_54645	chr1:2136671-2142113	Stomach_Smooth_Muscle
SE_55632	chr1:2138831-2139491	Thymus
SE_62490	chr1:2120386-2191742	Tonsil
SE_68393	chr1:2120436-2162432	TC32
SE_68394	chr1:2120436-2162432	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002203

chr1

2134602

2142348

Enhancer Sequence

CCATGCAGCC AGCTTCTTCC CTGCCTCAGA TCGGTGACCT GCACTCTGTC CAGGAGGAGG 60
GGAGACTTGC CCAGGGACAA ACCCGAAAAC ACGGCAAGGT CAGGGGAGGA GGGCACTGTT 120
TCCTGTCGAA GTCCACATTT GTGAAAAAAC ATTGATTGGG CAGAGAGAGG TGTTGTATTC 180
TGGAATGGAG GTGAGTGGGG GGCCAGTGAG GGCTGGGCCG GTGAGGGGTG GATGTGATGT 240
TTTGCCTGGC CCAAGGGAGC TGGTGCCCCA GGTTCCCAGT CTGCTGGCAG AGCTGGGTCC 300
TGGTGGGGGC AGAGCTGGGC AGGCCCACAT GGCCTGTGCA TCCAGGGTGT CTTGTCCCCT 360
TAATCCTTCA GAGGATGAAC CCCCACCCTT CGCCGGCCTT CTTGGGCGTG GTCTGGTAGA 420
TAACTGGAGC TGGGAGAGGC TGAAGACAGT CAAAGCTGCT CTCCTCTTTT CTAGGTGAGA 480
ACAGTGAGCC CGCAAGGTCA GGGAGCTGCC CCCAGGTCAT CTGGGCTGTC GGAGATGGAG 540
GCGGGAGAGG AGCCGTGTGC TCCTGATCCC TGGCCCAACG CTCTCCTTCC CCGTCGCCCA 600
CTCGGCATCG GCCCTACCCG GGGCCCGGAC TCCCACTCAC 640