EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS161-00059

Organism

Homo sapiens

Tissue/cell

PC3

Coordinate

chr1:2120230-2120980

Target genes

Number: 20
Name	Ensembl ID

MMP23B	ENSG00000189409
GNB1	ENSG00000078369
RP1	ENSG00000231050
CALML6	ENSG00000169885
TMEM52	ENSG00000178821
C1orf222	ENSG00000142609
RP11	ENSG00000226969
PRKCZ	ENSG00000067606
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240
AL513477.1	ENSG00000178642
MORN1	ENSG00000116151
RER1	ENSG00000157916
PEX10	ENSG00000157911
PLCH2	ENSG00000149527
PANK4	ENSG00000157881
TNFRSF14	ENSG00000157873
FAM213B	ENSG00000157870

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_02984	chr1:2120458-2122921	Bladder
SE_24063	chr1:2120663-2122484	Colon_Crypt_2
SE_28207	chr1:2120473-2122885	Fetal_Intestine
SE_29530	chr1:2120461-2122870	Fetal_Intestine_Large
SE_40333	chr1:2120433-2122106	K562
SE_46689	chr1:2120655-2122919	Ovary
SE_47622	chr1:2120663-2122616	Pancreas
SE_54645	chr1:2120364-2127955	Stomach_Smooth_Muscle
SE_55632	chr1:2120625-2121047	Thymus
SE_62490	chr1:2120386-2191742	Tonsil
SE_68393	chr1:2120436-2162432	TC32
SE_68394	chr1:2120436-2162432	TC32
SE_69135	chr1:2120546-2121995	H9

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002188

chr1

2120278

2122904

Enhancer Sequence

TCAGGAGATC AAGACCATCC TGGCTAACAC GGTGAAACCC CGTTTCTACT GAAAACACAA 60
AAAATTAGCC GGGCGTGGTG GCGGGCGCCT GTAGTCCCAG CTACTCGGGA GGCTGAGGCA 120
GGAGAATGGC GTGAACCCGG GAGGCGGAGC TTGCAGTGAG CCGAAATCGC GCCACTGCAC 180
TCCAGCCTGG GCGACAGAGC GAGACTCCGT CTCAAAAAAG AAAAAAAAAA AAAAAAACAA 240
AAAGAACGCC ACCAGAGGCT GGGGCTGCTG GCTCACGCCT GTAATCCCAG CACTTCAGGA 300
AGCCAAGGCG GGAGGATCGC TTGGGCCTAG GAGTTCGAGA CCAGCCTGGG CAACATGGCA 360
AGACCCCTCC ATCTGTACAA AAAATACTAA AAGTCGCTGG GTGTGGTGAC GCGCGCCTGT 420
AGTCCCAGCT ATTCAGGAGG CTGAGGTGGG AGGATCATCA AGCCCAGGAG TCTGAGGCTG 480
CAATGAGCCG TGATTGCACC ACTGCACTCC AGCCTGGGCG ACAGAGCGAG ACCCTGTCTC 540
AAAAAAAAAA AAACAAAAAA AAAACCGTGA CTGCACATGA GCTAACCACG CCTGTCCACA 600
AAGTTAGGAA AACGAGCTAC CCTCAGCCCG TCCGCTGTCC ACAGTGGGGG CGCCAGGGGA 660
AAGGGGTCAG CTTCCCCGCC TGGGGCTGTG TCTGGTTCTG ATTGCACTGC AGTGAATCTG 720
CCCTAAACCA AACGTCAGAA AGAAAAGCGG 750