Tag | Content |
---|
EnhancerAtlas ID | HS159-05310 |
Organism | Homo sapiens |
Tissue/cell | Pancreatic_islet |
Coordinate | chr6:52253170-52256600 |
Target genes | |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr6:52254495-52254510 | AGTTAATGTTTAATT | - | 6.56 | JUN(var.2) | MA0489.1 | chr6:52255377-52255391 | AGGAAGTGACTCAC | + | 6.15 | Lhx3 | MA0135.1 | chr6:52255573-52255586 | TAATAATTAATTT | - | 6.25 |
|
| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_03340 | chr6:52253085-52255876 | Brain_Angular_Gyrus | SE_04214 | chr6:52253002-52256108 | Brain_Anterior_Caudate | SE_04214 | chr6:52256220-52257204 | Brain_Anterior_Caudate | SE_04963 | chr6:52250679-52259985 | Brain_Cingulate_Gyrus | SE_06207 | chr6:52251162-52257636 | Brain_Hippocampus_Middle | SE_06960 | chr6:52252878-52258020 | Brain_Hippocampus_Middle_150 | SE_08050 | chr6:52250972-52259364 | Brain_Inferior_Temporal_Lobe | SE_12385 | chr6:52253060-52257034 | CD3 | SE_16054 | chr6:52253695-52256439 | CD4_Naive_Primary_7pool | SE_17578 | chr6:52252868-52267051 | CD4p_CD25-_CD45RAp_Naive | SE_19089 | chr6:52252884-52266905 | CD4p_CD25-_Il17-_PMAstim_Th | SE_21851 | chr6:52253151-52257043 | CD8_Naive_7pool | SE_58572 | chr6:52147442-52265048 | Ly1 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr6 | 52254120 | 52254219 | chr6 | 52254281 | 52255602 | chr6 | 52255784 | 52255834 | chr6 | 52255964 | 52256018 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH06I052388 | chr6 | 52253119 | 52256859 |
|
Enhancer Sequence | GTCAGGAAAA AAAAAAAAAA GCAATAAATG TAATGGGTTT GAATCATCAT GAAACCATAC 60 TCCTCAACCC CCAGCCCCCA TACGTGGAAA AATTGTCTTC CATGAAATTG GTCCCTGGTG 120 CTGAAAAGGT TGGGGACCAC TGACCTAGAT GAATGCCTAG ATGAATGGTA TTACTGCCTT 180 TATAAAAGAA ACTCAGGAGA GCTCCCTTGC CTCTTCTGCC ATGTGAGGAC ATAACAAGAA 240 GACAGTCATG TTTGAACCAG AAGTGGGCCC TCACTGGACA CCAAATCTGC TGGTGCCTTC 300 ATCTTGGACT TTTGCAGCCT CTAGAAACTG TGAAAAATAG ATTTCTGTTG TTTATAAGCC 360 ACCTAGTCTT TGATATTTCC TTACAGCACC CTGAATGGAC AAAGACAGAG GGCTTAATAA 420 GACATGATGA GTTCTACTTC AGGCTGTCGC TAAGCTTCAC AGGGGAGGGG TTATATCTGA 480 GCCTGAATTT GAGAGAGAAG TGGGTTTTGC CAGGCACAGC AGGCTACAAT AACATTGGCG 540 ATGTCAAGTG TGTGGCTTGT TCAGGCAATC AGGACAGTCT GTTCTGCCTT TTGTATGCAA 600 CAAGAATAAA AACGAGTTCT AACAGTGCTC CAGTGTTATT TTACATTATG TTTCTCTGCC 660 TGGCCCCTCC TTTTCCTAAG TCTTTGCTTA GGCATTCTTG GTCATAAAAA TGACAAATGG 720 TAGGAGATGA TAGACCAAAA ACAAGCTGAT GGTTAGAAAT TCAGCCAGCA ATTTAAATAT 780 TGGTGCGGAT ACCTAGCAAG TGGATGAACC ACACAAATAA ATAAGATCCA ACTCAAATGG 840 TGTTTTCTTT TGAAAACCCA CATTTTCGTT TTCTTAGATC TCACTGGTTT TTACCTTTAG 900 AAGCAGGCAA AGGATAGTCA TTCACTTTGT TTTTGAACAA TGATCTATTG ACACATTCTG 960 GGGACATCTT TCCTCTGACT GTTTGCTGAT AGAAATAAAG CATAGGTAAG CCAGTGTTCC 1020 TGTCTCCAGA GGCTTGCAAT TCAATAAGCA GAAGAGAGAA GGCTCTCTAC ACACACAGTA 1080 GTGAAGTAAT GGGCAAGCCT GATGTTCTCC TTACCAAAAT ATGTGGAATA GATAGATAAG 1140 GGTTGGGGGC GGGGGAGGAA TCAAGATGGC CTGGAGAAGG CTTTGTGGTG ATTTGGAATT 1200 GAACTAAGGC CTTGGAGATA TCTAAGGAGA AATGAAGAAT AAAGTGACTT GCTTGACTCT 1260 TTATAGCAAA TAAAATTGCT GGGTCTTAGA ACCACCAGGA GAGTGTACTG TTGTCACTGC 1320 AGAAGAGTTA ATGTTTAATT GCTAGGGAAC ACAGCTTTCT TTATATGGTG CTCCAAACTC 1380 TAGCTCGATT TGTTATCTGA TTTTCTGCTG TGGAAAGGGC ATTTCCAAGA TTGATTTCCT 1440 GCCAGTGGAA ATGAGCAGCT CTCTTCACGT TCACCCGGGT TGGCCCGGGT CCCAGCTGGT 1500 TTGCAGATCA GTGATGAAGC TTCCTGCCGG TGAGAAGCTA GATCTAGTTG AGAGGTTGCC 1560 TGACTGAAGC CAAACCACAC CTAACGAAGC CGATAGTTAC ACTCATGTAG AAAGTCCAGG 1620 GAGACACCTG TCCCTAGGCT TTAATTAGTG GGAGTTTCAG ACAGCAAAGT TTACCTTTAC 1680 TCAAACAAGA AGCCTCAGAA GAACATGATC TTCACACCTG AACTGTTGAT TGCCTGGAGA 1740 CTGCTCAGTG TGTTCTCCCA GTAAATTGTT CCCAGCTCCT CTGACTTCTC CCACTCGACA 1800 GATTAAACAC AGATACTATT TATTCCATGT GGCAGATGCA TTCTCTGTCT GTAATGATGC 1860 ATTTTGAAAC CAGTACTTTC TCAAGTGAGA TTAGCTGAGA TGTGGAAAGT ATAGGAAGTG 1920 ACAGAACAGA CAGAAATTCT AGCTAGAGGG TTCTAGTTAG ATAAAGAGAA AAAGGCACTC 1980 AGAGGAAATT TGCTCTGCTC ATCTTTCCCA GGGCACAGCA ACAAATTAAG GCTGTCTTTT 2040 CTTTCTCCTC TTAGGAATAT TATAGGGCAC CACAGAGGAA AAGATTCATA AGTGGAGAGC 2100 TCACTGAGCC CAGAAGGACA CATCTTGCTG CCAGATCTGT GGCAAAAAGG TGTACCTTAC 2160 TTTTTTTTTA TAGGCACGGT TCAGCCGTAC CACAAACCCA CATGGTCAGG AAGTGACTCA 2220 CGTATTAATG CCGTTTGAGT TTGTGTGCTG TGGGGAAGGT CTTTTGACAA TATTGTGTAT 2280 ACTGGCTTTT CCAATCTAAG AGAACATCTT TGCTGCATTA ACAGTAGATG TTACATATTT 2340 TTTTCCCTTT AAACCCCCCA TGACCAATAG CTTACCCTAT GGCAAGTATA GTTAGGTTAC 2400 TCGTAATAAT TAATTTGGTA TGCTAACTAG TTGAGCTCAC AGAAAAATGC AAGTATGGGT 2460 GTATTCCTTT ATAATGCTGG GGTGTTTCTT GGGGAGGGTC TTAATATTTT ACCAACTTAG 2520 GTTTTACCAA TTTTTGCATA TTTATGTCAA ATATTCCTAT TTGCAGAGTA GTACTAACTT 2580 TTGCTTTCCA ATTACAAAAG TAGTAAATGT TTGTTGTTAA AAAGTACGAT AATGATAGTA 2640 TTTCCAGAAG AAAAGTAAAA TTCCCCACAA TCCCTTCATG GCAATAGCTA TATTGTTTTG 2700 ATTATATGCA CTTCCATACT TCATCTGTAC CATGTTTGTA TGATTACAAA AATAGGGCTG 2760 GGCGGAACAC ATACTTTAAA TTTGTTTTTT CCTTTACATG TCTTTGACTC ATTTATTCAT 2820 TCAAGAAATC TTTTTTGAGA ATGTACAATG TGCTAGTCCA TCACTTTTCT AAGTGCAGTG 2880 GAGACTACAG TGAAAAACCA ATGGAGCTCA CATATCATGT GTATCTTTGT ATAACAATAA 2940 ATGTAAATAT GCTAGTTATT TTAATAAGTG CATAGTATTC TATTTTATAG ATTTATCTTA 3000 ATTTACACAA TCAAATACTC CATTTTTGGA TGTCGAAATT CTGTTTGTTA GGTTTTGTTA 3060 AATATAGGGA GGAAATATGC ACTGACCATT GGTGAATCTG AATCGATGTT CAAATGATCT 3120 CTGCTAATAA CAGGATTGCA CTGGTAGTGC CATTCTTTCA AATATGACTT TACAAATAGT 3180 GATATGCTCC TTGGAAGATG TAGCTATAAA GATCAGTATG AGCCCAGAGT TCTCTCACTT 3240 AACGACTATG GAGATCCTGA GGCATGTGAG ACTGTTTCCA ACTCCACCTC TGGCTCAAAG 3300 GCTGCTTAAA GCACAGTTCC AGTCCTTATA AATGGACACC AAGTTGTCAT TTTGGCTGCT 3360 ATTCCTTTGC AGCCATTTAT AATTATGCAG TGATGTGTGA AGCTGGGCTT CTGTGAATTC 3420 TGGAAGCATT 3430
|