| Tag | Content |
|---|
EnhancerAtlas ID | HS155-09023 |
Organism | Homo sapiens |
Tissue/cell | Ovary |
Coordinate | chr20:49039700-49040220 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Hnf4a | MA0114.3 | chr20:49039767-49039783 | GAAGAACTTTGACCCC | - | 6.15 | | PLAG1 | MA0163.1 | chr20:49040011-49040025 | CCCCCGTGACCCCC | - | 6.08 | | RREB1 | MA0073.1 | chr20:49039969-49039989 | ACCCCAGCCACCCCCTCCCA | + | 6.9 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_00918 | chr20:49039750-49040682 | Adrenal_Gland | | SE_31629 | chr20:49037959-49041028 | Gastric | | SE_34001 | chr20:49037915-49041306 | HCC1954 | | SE_35076 | chr20:49038201-49041372 | HeLa | | SE_36034 | chr20:49037885-49041272 | HMEC | | SE_42215 | chr20:49039704-49040844 | Lung | | SE_48118 | chr20:49039080-49041243 | Psoas_Muscle | | SE_48691 | chr20:49039779-49040484 | Right_Atrium | | SE_50944 | chr20:49037958-49041085 | Sigmoid_Colon | | SE_51230 | chr20:49039655-49040755 | Skeletal_Muscle | | SE_52679 | chr20:49038035-49041184 | Small_Intestine | | SE_53316 | chr20:49039680-49040728 | Spleen | | SE_54839 | chr20:49038643-49040764 | Stomach_Smooth_Muscle | | SE_64485 | chr20:49038442-49040784 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I050421 | chr20 | 49037982 | 49041285 |
|
Enhancer Sequence | TAAATAAATA AATAAATGAA AGTCTGGAAG GAGGGTGGGG CTCTCGTGTT CTGGGAGGAT 60
GATTTATGAA GAACTTTGAC CCCAAATCCC TGGGAGGGGC CTGTGGCCAA TCCCAGACAA 120
GCAGGGCCTG GCTCTCCTTG GACAGTGTTT ACAAGCTCGC TGATGACTCG GCCTTCTGCC 180
TTCCTGCGGT TTGCTAATCA CTGGGTGCTA TGTGCCGGGA TGTTCTCCTG CTCCTCAGCC 240
CTGAGAGCAC ACTCTGACTC ATGCCTCCTA CCCCAGCCAC CCCCTCCCAT CACCACCAAG 300
GCTGCCATCT CCCCCCGTGA CCCCCAAGGC CCCACAGAAT CACACGACCC TGGCACCAGG 360
AAGTGCACCT GTGTCTCCAA TCAGAACTGC CCATTTCACA GAGGAAGAAA CTAAGGTCCC 420
ATGAGAAAAG CCTTTCCCCA AGTCTCACCC CAAGACAGGA ATAGCACCAG GGCCCGGTCC 480
CAGGTCTCCT AACACCTGGT CCTAATTTTT CCCACTGTTT 520
|
