| Tag | Content |
|---|
EnhancerAtlas ID | HS155-07328 |
Organism | Homo sapiens |
Tissue/cell | Ovary |
Coordinate | chr19:41827400-41828490 |
Target genes | | Number: 12 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| TFAP2C | MA0524.2 | chr19:41827779-41827791 | TGCCTTAGGGCA | + | 6.04 | | TFAP2C | MA0524.2 | chr19:41827779-41827791 | TGCCTTAGGGCA | - | 6.32 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_01266 | chr19:41827473-41832460 | Adrenal_Gland | | SE_01941 | chr19:41826114-41834937 | Aorta | | SE_02341 | chr19:41827299-41835217 | Astrocytes | | SE_06609 | chr19:41827940-41835020 | Brain_Hippocampus_Middle | | SE_10928 | chr19:41826548-41839191 | CD20 | | SE_12871 | chr19:41828331-41830463 | CD34_Primary_RO01480 | | SE_13335 | chr19:41827590-41831869 | CD34_Primary_RO01536 | | SE_14717 | chr19:41828274-41835424 | CD4_Memory_Primary_7pool | | SE_17526 | chr19:41828356-41835571 | CD4p_CD25-_CD45RAp_Naive | | SE_20013 | chr19:41827344-41835576 | CD56 | | SE_20919 | chr19:41828272-41831918 | CD8_Memory_7pool | | SE_22408 | chr19:41827603-41828479 | CD8_primiary | | SE_26210 | chr19:41827478-41831409 | Duodenum_Smooth_Muscle | | SE_27131 | chr19:41827046-41832712 | Esophagus | | SE_31885 | chr19:41826804-41832672 | Gastric | | SE_37091 | chr19:41826651-41835398 | HSMMtube | | SE_38093 | chr19:41826925-41835502 | HUVEC | | SE_40475 | chr19:41828286-41832867 | K562 | | SE_41125 | chr19:41824878-41835177 | Left_Ventricle | | SE_44313 | chr19:41826974-41833634 | NHDF-Ad | | SE_44950 | chr19:41827136-41832669 | NHLF | | SE_45824 | chr19:41826675-41835471 | Osteoblasts | | SE_48776 | chr19:41825187-41832669 | Right_Atrium | | SE_50262 | chr19:41826769-41835431 | Sigmoid_Colon | | SE_52575 | chr19:41827074-41832699 | Small_Intestine | | SE_54849 | chr19:41827115-41832913 | Stomach_Smooth_Muscle | | SE_62666 | chr19:41801738-41841748 | Tonsil | | SE_65513 | chr19:41827124-41830643 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I041321 | chr19 | 41827009 | 41835422 |
|
Enhancer Sequence | TCCACAGGCT CTGGGGATAA GGCGGGGACC AAAACCAACG AAAGGCTTCC CTGCCTGAAA 60
AGGGGTCCCA CTCTAGTGAG GAAGATCTAG AATTTTCTAG CACTTCATGG TGATGGGGCC 120
ATGAGGAAAA GTGAAGCAGT GGGAGGGGAG TGACAGGGTG GCTAGGGAAG GCCTCTCTGA 180
GGGGCTGACA GCAAAGGCCT GCAGGAAGTG GGAGGAGCAT TCCTGGCAGA GGCCATAGTA 240
GGTGCCAGAG CCCCCAGCAG CACCAAGGGG CAGAAGGGGC TGGAGCAGTC GCAAGGGGTC 300
GCAAGGGGGT AGGAGATCTC TGAGTGGCCA AATCAAGCTA GGCTTGGCAA CCCAAGTGCG 360
TGCTGCTGGG TTTACTTGCT GCCTTAGGGC ATGGGCAGCT GTCCTGCCTG TGGTCAGCTC 420
TGGCTAATCC CGGCCTCTAT CCACTGGAGG GCAGTAGCAA GCCCCCAGTG ATGACGTCAA 480
AATGTCAAAA TGCCGTGGGG GCAAAATTAC CCCCAAGTGG TTCTTTGTTG AGAGCCACTG 540
CCTGCTTGAG AATGTAAGCC CATGTGTCGC CACATTTTAC AGCTTTTTAA GAAAAACTAG 600
AGCTTTGGGG TTTTTTTTAG ACAGGGTCTC CTTTGTCACC CAGGCTGGAA TGTGGTGGTT 660
TGATCATAGC TCACCGCAGC CTTGACCTCC TGGCCTGAAG TGAGCCTCCC GCCTCAGCCA 720
ACTGAGTAAG CTGGGACTAC AGGTGCTCAC CACCACGCCT GGCTACTTTT TCAATTTTTT 780
TGTAGAGACA GGGTCTCCCT TTGTTGCCCA GGGCTCCAAC TGCTGGGCTC AAGCCATCTT 840
CCTGCCTTGG CCTCCCATAG TGCTGGGATT GCAGGCATGA GCCACCATGC CCAGCCCAGA 900
GTTTTTGTGC AAACTCTGAT TTGGAAAATG TTCCCTTGAG TTTTAAACCC TGAGAGTTTT 960
AAACACTATC TCCCTTGGGA GGGTCAGCTC TGACGGCTGC CAGCACATGG CCTTTGACAT 1020
CAGGGTGCCC CAGGCCTTTG ACCTGGGCAT CCGAGGGTCC CAGGGAGACC CAGTCCTTGA 1080
CAGCCTCCTC 1090
|
