Tag | Content |
---|
EnhancerAtlas ID | HS155-07178 |
Organism | Homo sapiens |
Tissue/cell | Ovary |
Coordinate | chr19:18583820-18585640 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myod1 | MA0499.1 | chr19:18585446-18585459 | GGAAACAGCTGCT | - | 6.14 | Tcf12 | MA0521.1 | chr19:18585449-18585460 | AACAGCTGCTG | + | 6.32 |
|
| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_01013 | chr19:18583782-18585231 | Adrenal_Gland | SE_06012 | chr19:18583560-18585659 | Brain_Hippocampus_Middle | SE_08139 | chr19:18583607-18586053 | Brain_Inferior_Temporal_Lobe | SE_08861 | chr19:18584782-18585073 | Brain_Mid_Frontal_Lobe | SE_12155 | chr19:18585169-18587297 | CD3 | SE_15037 | chr19:18584199-18588821 | CD4_Memory_Primary_7pool | SE_17983 | chr19:18583928-18591813 | CD4p_CD25-_CD45ROp_Memory | SE_19379 | chr19:18584343-18587227 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20439 | chr19:18584612-18591598 | CD56 | SE_21047 | chr19:18584730-18587121 | CD8_Memory_7pool | SE_22689 | chr19:18583973-18591671 | CD8_primiary | SE_23216 | chr19:18585225-18585732 | Colon_Crypt_1 | SE_23893 | chr19:18585298-18585693 | Colon_Crypt_2 | SE_26168 | chr19:18583622-18584503 | Duodenum_Smooth_Muscle | SE_26932 | chr19:18583788-18585763 | Esophagus | SE_31681 | chr19:18583754-18585763 | Gastric | SE_41560 | chr19:18583829-18585119 | LNCaP | SE_42344 | chr19:18583735-18585788 | Lung | SE_50125 | chr19:18583720-18585782 | Sigmoid_Colon | SE_51145 | chr19:18583648-18585641 | Skeletal_Muscle | SE_52434 | chr19:18583680-18585846 | Small_Intestine |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr19 | 18585304 | 18585354 | chr19 | 18585370 | 18585459 | chr19 | 18583828 | 18584810 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I018472 | chr19 | 18583787 | 18592442 |
|
Enhancer Sequence | AAATGCACAC ACTCTGAAAA TTATAGGCAA GGTCACCGGA GCAGGGTTTT AGAAGGATCA 60 GTAGGAGTTC CTCAGATGGA CAGAGGGCTG GGGACACATG ACAGGTAAGA ATGGGGCCTC 120 CAGACACAGG CAACAGGCTG GCGGAAGGCC CAGGATGCAG GGGCGGGGAG TGTGCCATCC 180 TTGGAAAGCC ACCACCAGCC TGTGAATCCA CCGGGAGAGA AGGGCAAGGC TCAAGGTGCT 240 CACAGCCCTG CCAGGAAAAA GCAAAGACAG GTCAGGGTTG ACCCTGGATC ATGACTCTCC 300 CAAGGACCCA TACAGGCAAA AGCAGCCCCC TCCACTCTCA CAGCCCCAGC TGATCCCCTG 360 AAACCACCAA CCAGGCTAAG TCCTGTCTCA CAAACACTGG CTTTTAACAA CCAGGTGGGT 420 GAGCACTGTC TATCAGAGCA GGTGCGGTGG GGCCACCTTG GAGCCTGGGG TGGGAGCCTG 480 AGGCCTGCAC AGCTCCACCA CACGGCCTTG GGGCAGTCAC ATGGCTTCTG GACAGCTGGT 540 CACTGAGCTT GGAGCAGTGG AATTTCCAAG GAAAAAATAT ACAAAAGAGC TCAAAATAAA 600 TACTGACGCT TCAGCTATTC AGAGACCAGC CTTCTGGCAG TATCTGAGAA AGAACTGCGA 660 GCCAGAGGAG GACTGCACCT CTGCATCTTC TTCCCTCTTC CCAACCTGGG GCCCTAAGCG 720 TAGATCTCAG TGTCCCAGAT GCTACCCCAC AGCATAGCCC TGGCTGATCA CCATGATTCT 780 TGGTCCCCAA ACCCACCCCT GCACCACCTG GCCCCACTGC CCCACTCAGG TCCAGCCCAC 840 TGAGATGCCC TCCCACCCAG GCCTTGCTCC TGTCCTCATA GTACCCCGTC CTGGGCTCCG 900 TCTCCACTGC TCAGGTCTCA CTCCCTCCCA CCCTGGTCTG CCCATAGCTC TCCCCAGAGG 960 GCAAAGCACT ACTTGAGTCT GGAGAGGCCT GTCGGAAGAC CCGGGGTAAG CGGAGCAGCT 1020 CCACACCTGC GACAGTATCA GAGACAACAC CTACCCCATG GGTCAGCCCA GGGTCCGCCC 1080 TCTGGAGCCA CTCAGCACTG TTCCAGGACT CCAGCTTGAG ATGGCACAGG GCCCTCCAAC 1140 TGCTCACATC CAGTGCCCAT CAGTTGGGAA AGACAGGAGC TGCTAGGAGC AGCGGAAGCC 1200 GCCTGGGACA TGAGAGATGG CTGGCCTTTC AGCACCTGCT CCATGTGTGC CCTGAGCCAT 1260 GGGTCTGCTT GGCCAGCTTA GACCACGCAG CTGTATACAT ATGACATGCA TAGTGCCCAG 1320 AGTGGGAGGC ACCGAGTGCC TCACTTTGGT CTACCAGGAG CCCCCTTCTT TGCCAAGTCT 1380 CTCCAAGGAT TTTGCCAAGA CTCCCCAAGG ATTCTGCTGT TTAGGGGAGA ACAGAGGGAT 1440 GGTGCCCCTG CACGCTAACA CCACCCAGGC CGTGATGCCC CAGAAACTGC CCCATGCTTC 1500 TCAAACACGC CACCCCTCAA CAAATACATG GGCCCACTCC ACAGCGAGCA CGATTCACGG 1560 CGCAAGCCAC CACTGTCCAT GGTGCAACAC GTCCATGGCC CACTCCCTTG TCCTGTTCCA 1620 AGACCAGGAA ACAGCTGCTG CAGTCACAAG GGCCACTGTG CTACTGCGAC AAGGGGGGCT 1680 CGTCTAGAGC AGCTCAGGAA GGGCTAGCCC TGTACCCCAA AACACGACTC AACCACCAGC 1740 CTGTGCTGCT ACTGCAGAGA ACAGGGGACC TCGGCCTGGC TGGGACCTTG GGGAAGCAGC 1800 ATCTGAATGA CCTTTGCTAC 1820
|