| Tag | Content |
|---|
EnhancerAtlas ID | HS155-00196 |
Organism | Homo sapiens |
Tissue/cell | Ovary |
Coordinate | chr1:19727680-19729280 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Myod1 | MA0499.1 | chr1:19728661-19728674 | AGCAGCTGTTCCC | + | 6.92 | | TFAP4 | MA0691.1 | chr1:19728951-19728961 | AACAGCTGAT | + | 6.02 | | Tcf12 | MA0521.1 | chr1:19728660-19728671 | CAGCAGCTGTT | - | 6.32 |
|
| | Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
| SE_01631 | chr1:19723726-19729381 | Aorta | | SE_05833 | chr1:19726303-19729509 | Brain_Hippocampus_Middle | | SE_18410 | chr1:19725443-19729168 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_25786 | chr1:19726004-19729195 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19725748-19729360 | Esophagus | | SE_28668 | chr1:19726413-19727893 | Fetal_Intestine_Large | | SE_31164 | chr1:19727698-19729374 | Fetal_Thymus | | SE_31447 | chr1:19728502-19729355 | Gastric | | SE_42185 | chr1:19728376-19729307 | Lung | | SE_45720 | chr1:19723558-19729015 | Osteoblasts | | SE_46635 | chr1:19727710-19729284 | Ovary | | SE_50058 | chr1:19726388-19729383 | Sigmoid_Colon | | SE_51211 | chr1:19725539-19727979 | Skeletal_Muscle | | SE_52345 | chr1:19727683-19729384 | Small_Intestine | | SE_54550 | chr1:19726107-19728569 | Stomach_Smooth_Muscle | | SE_65446 | chr1:19728630-19729569 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019397 | chr1 | 19723770 | 19729243 |
|
Enhancer Sequence | AGGCAGAATA AAAACCAAAA AGGAAAAAAA AAAAACTTCC CCCAAACAAA AGTGAGGGCT 60
TTCAAGGAGA CTTGCTGAGT GGGCAAACAT TTTGGAAAGA TGGAATTTTA AACACAAACA 120
CAAAAGGGCA AAGATTTGCA GCAGAAGAGC TATGCACACA GCCGGGAGGA CTTTAATTAG 180
GGAAAGCTTT GCAAAGCCCA GGGAGCATCA GCATCGGCAA ATCTCCCCTT GGTCTCCGGA 240
ATGGAAAGAA TGTGGAAACC AATGGGTGAT CAAGGAGTTC GAATTTTGCC TGACACTCTT 300
GCTGGGAATG AAGCATGCAG TCCTGTCTTT TGCCACCTTT TCAGCAGCCT CAGGTGAGCC 360
TTTTAAAAAG GTGAAAAACG AAGGACCACC TAGCCTGGGA GAAGCCAGGG TGGATCCTCT 420
CCTTCCTAGG GTGCTTCCTG CAGATGGCAC ACAGCCAAAG CTCTTCTGGT GTTTTAAGGC 480
AGAAACAGAA TTCAGGGGAG GACTAAACAA CCCCTTTAGA GCTACGTGCT GTGTTTTTTG 540
TTTGCATTTT TCCAAGTCCA GGCATTTTTC CAGGTATTTC CAATGAGACT GAAATGGCCT 600
ACACATAGGC TGACGACCTA TAATAACATA AGAAAGTGAT GTTGGCCCCC TGCTCCACCC 660
AGAGGGGACA TCTGCTTATT TGGCTTCCAG GTGGTGGGAG CAGTGGTTTT CCCCAAACAG 720
CTAATACCCT TCAATTCTTT GCTTTCTGTA TCATGAAGTT CACTGGAGTT TGGAGCACAG 780
ACTCTTTAAA CCAGTAATTT AACTCTACTT TTGAGGATAC CCTATGCCCC CAGCAGTTAT 840
GAGAAGGGTT GCCAAATCTT AACTCATAAG GGTGACAGGA TCAGGAACAA AGGCCTGGAC 900
TCTCCACCCT TCTCCTCTGC CAAAATCTAC GAGTTCAGGA AAATGGCAAG CCAGGAGTTT 960
ACTTTAGGTT CCCTCAAGAG CAGCAGCTGT TCCCACCAGG GCTGCGAAGG AATCAACAGG 1020
AACTGAGAGA ACACCTGAAT GGTCTGATTC AGAAAGTCCC AGCTCCCTGT GAGGTCAATA 1080
AAGAACTTTG TCTCAACAGA GGCAACAAGG CCACTGCCTC CTAGGAAAGG ACTGATGTGG 1140
GCTTTTCTAG AGGCAGGCAG GCTCTTGGAT CAACAGGCTT ACAAGGGCAC ATTTCTCAGT 1200
TACGATCTTA AAATTGCAGG GAACCTGCTG ATCTCTGTCC CTTACCCATC TAGAAAGTCT 1260
GAGTGGGAGC TAACAGCTGA TCCTCAGCAA AACCAGAGTG TGCGCCCATC ACCTGCTTTC 1320
TGGTAAGGGA CCCATGTGGC CTGAATCAAA ACTCAAAGCT CACTAGACAC CAATTCACAC 1380
GCTCTATCTA ATCAGGCAGA AACCCAGCTG CTCCTGCTCA GTCCCTGCCC AGCTAGTACC 1440
TTCCCACCAC CCACCAGCTG TATCTCAGGC TCTGCCCACT CTAAGCTTTC CCTGGGATTT 1500
GCCTGCCAAG GGTGGGCCAC GGTGTCCTCT GTGGTGCTCT GCAGTGCCCA TGTTCCTCAC 1560
ATCAGAAGCC TTGCATTCTG GCTGGGAGCG GTGGCTCACC 1600
|
