Tag | Content |
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EnhancerAtlas ID | HS150-05441 |
Organism | Homo sapiens |
Tissue/cell | NT2-D1 |
Coordinate | chr19:54931560-54932320 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RFX5 | MA0510.2 | chr19:54932264-54932280 | CGTTCCCTTGGCAACC | - | 6.02 | RFX5 | MA0510.2 | chr19:54932264-54932280 | CGTTCCCTTGGCAACC | + | 6.41 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_03534 | chr19:54931743-54933853 | Brain_Angular_Gyrus | SE_04377 | chr19:54926568-54933990 | Brain_Anterior_Caudate | SE_05139 | chr19:54925733-54934239 | Brain_Cingulate_Gyrus | SE_06079 | chr19:54925536-54935449 | Brain_Hippocampus_Middle | SE_07030 | chr19:54925765-54936104 | Brain_Hippocampus_Middle_150 | SE_08186 | chr19:54926601-54935209 | Brain_Inferior_Temporal_Lobe | SE_47477 | chr19:54931719-54932932 | Pancreas | SE_65407 | chr19:54931051-54933049 | Pancreatic_islets |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I054417 | chr19 | 54928982 | 54933470 |
|
Enhancer Sequence | GCCCCAGCCC CCGCAGCCTG GGAACAAGAG GAGCTTTGTA GGACTCTGAA CAATGGGGCG 60 GGGACACTGG GCGTCCGACC CGAGGGATGG GGGTGGAGGC CCAGCCGGGG CTGGGAACCG 120 GGAGGGTGTC AGGCTCCCGC CCCCTCCACT GCGGGACACC GGCCGGGGGC GGGGACGGGA 180 GGGGTCTGGG GCCCCACATT CAGGTCCCAC AATGGAGCTC TGTGTGTCGG TAGGGTGGGG 240 GCGGGGGCAC GGCTTCTCGC CCATCCTCCA GCCTCCCTCC CACATTCCCT TACTTCCCTC 300 CCAGCTGGCC CGACGCTTGG GTCCCGGGTG GGGGAAGGCC GAGAGCTCCA GGCTCAGCGT 360 CCCCCCAGGA GATGGTGGCA GCTGCCCCCC TTGTACCCTT AGGAACCCCC AGGAGGTGGG 420 GGCGGAGAAC GTCTCAGCAC TGAAGGGTTG GCACTGCAGG CCCCAAGGAC CCTAGGGCAC 480 CCTAGGACAG GTGCCAGGAG GGCTGCCTGC CTGGCAAAGG ATGCGGGGGA AGGGTGTGGG 540 GCAGGCAGTC CTAGGGAGGG GAAGACGGCC CATCCCGGAG CTGGGTGTGA CTGGGGTTCT 600 GCTCCAGGGA GGTGCGAGTT AAATCGGGGG CTCCCTCCCC CCCACCACTC CACCCACCAT 660 TAACATCACA ATGACGTCCC TCCGCTGGGG GAGTGAGGCC TTCCCGTTCC CTTGGCAACC 720 GACGGGGGCC AGGCTGAAGT CGCCCTTTTC CCACGGGCTG 760
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