EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS150-01214

Organism

Homo sapiens

Tissue/cell

NT2-D1

Coordinate

chr1:203297600-203298380

dbSUPER

Number of super-enhancer constituents: 47
ID	Coordinate	Tissue/cell

SE_03985	chr1:203291109-203297800	Brain_Anterior_Caudate
SE_04945	chr1:203289338-203297990	Brain_Cingulate_Gyrus
SE_05898	chr1:203289669-203298247	Brain_Hippocampus_Middle
SE_06796	chr1:203291248-203297919	Brain_Hippocampus_Middle_150
SE_09289	chr1:203291619-203298025	CD14
SE_10170	chr1:203289119-203297915	CD19_Primary
SE_10871	chr1:203284966-203298704	CD20
SE_11831	chr1:203289035-203298012	CD3
SE_13716	chr1:203293742-203297798	CD34_Primary_RO01536
SE_14427	chr1:203288978-203298166	CD4_Memory_Primary_7pool
SE_15408	chr1:203295550-203298184	CD4_Memory_Primary_8pool
SE_15911	chr1:203292189-203297908	CD4_Naive_Primary_7pool
SE_16309	chr1:203295074-203298281	CD4_Naive_Primary_8pool
SE_16865	chr1:203295117-203298027	CD4p_CD225int_CD127p_Tmem
SE_17312	chr1:203288163-203298349	CD4p_CD25-_CD45RAp_Naive
SE_17785	chr1:203289099-203298642	CD4p_CD25-_CD45ROp_Memory
SE_18348	chr1:203288795-203298385	CD4p_CD25-_Il17-_PMAstim_Th
SE_19143	chr1:203291537-203297856	CD4p_CD25-_Il17p_PMAstim_Th17
SE_19992	chr1:203292693-203298152	CD56
SE_20762	chr1:203295194-203298163	CD8_Memory_7pool
SE_21467	chr1:203295492-203298094	CD8_Naive_7pool
SE_21932	chr1:203295291-203298233	CD8_Naive_8pool
SE_22316	chr1:203289029-203298361	CD8_primiary
SE_24893	chr1:203295590-203297714	Colon_Crypt_3
SE_24893	chr1:203297840-203298585	Colon_Crypt_3
SE_25439	chr1:203287998-203298450	DND41
SE_25807	chr1:203291502-203298042	Duodenum_Smooth_Muscle
SE_27668	chr1:203291238-203298070	Fetal_Intestine
SE_28606	chr1:203289310-203298153	Fetal_Intestine_Large
SE_29589	chr1:203289136-203297695	Fetal_Muscle
SE_30896	chr1:203287761-203298586	Fetal_Thymus
SE_31419	chr1:203297740-203298675	Gastric
SE_32519	chr1:203292821-203297877	GM12878
SE_43501	chr1:203288039-203298141	MM1S
SE_50070	chr1:203288986-203298586	Sigmoid_Colon
SE_51128	chr1:203289260-203297849	Skeletal_Muscle
SE_53333	chr1:203291334-203297730	Spleen
SE_55095	chr1:203288068-203298519	Thymus
SE_58291	chr1:203236214-203310877	Ly1
SE_58901	chr1:203236169-203298087	Ly3
SE_59628	chr1:203236329-203298077	Ly4
SE_60396	chr1:203236100-203315897	DHL6
SE_61013	chr1:203236073-203298344	HBL1
SE_61446	chr1:203236043-203309894	Toledo
SE_62225	chr1:203236326-203298200	Tonsil
SE_65315	chr1:203295796-203297687	Pancreatic_islets
SE_67145	chr1:203288039-203298141	MM1S

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I203319

chr1

203288634

203298409

Enhancer Sequence

GGTGCTGGGG ATAGCACTAG ATCCTAAGGA CATTTAAAGT CCTATGAGTA AAGTAATTTA 60
AGACTCAGAA TAAAACTTGG TATGGTTTCA AGGCCCTGGG ATGGGTCCTG CGTTTGGCTC 120
CTAGATTTTT ACTAAGGGAG AATTATCTTG GCAAGACTAG ATTTCTCTTT TCTTCAAGGT 180
CTTTTCTTCA CATTTCCACC TCTCAAAAAT TTTTAGAACA GCAGCAAGCA AGGACTTACA 240
ACTCCCTTTT TAATAGGATT TAACTTTCTC CTTTTGTTAG GTAGAACATT CCATAAATGT 300
TCTCTCCATA TATGCACATT GACACTTAGA TGGGCTTGTT TGTTTTCCCC AAATCCCTTT 360
CCTGAAGTCT TTTCGTGTCA CCTGGAGACT CACCCCTTCT GCATTCTCTT GCCTGCCCCA 420
AACATACCAC ATGCTGATAC ATCATACATT ATCTTCAGTG GACGTGGAGA CTGGTTGTTC 480
AGTGCTCACA GACCCCTGGC GGCTGTCCAG TCCTATCACC TGCTGGGCTT GGTTGATGTT 540
TCACATTGTT AAGAACAAAA GCAGTGATGC GTCTGGGGCA TTTCAGTGAC GCCTGACGGC 600
GAGGTCAGGG AAGAGGGTAA GGAACACACA AAGATGGGAT ACAGTTCAAT GGGGAGCCAG 660
TAAGACTGGG GTTCTGGGGT TCAGTCTTGA GTCTGTGCCT TTAGGGAGAC AAGTCAATTA 720
AACGTGCTAG GTCCCAGTTA CCCTGTCTTG TAAAGTAGGC TGTATCATAC CTGTATCCTT 780