Tag | Content |
---|
EnhancerAtlas ID | HS149-00777 |
Organism | Homo sapiens |
Tissue/cell | NKC |
Coordinate | chr20:46115290-46117430 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr20:46117175-46117196 | CTTTACTTTTTTTTTTTTTTT | + | 6.01 | IRF1 | MA0050.2 | chr20:46116039-46116060 | GTTGGGTTTCAGTTCCATTTT | + | 6.16 | IRF1 | MA0050.2 | chr20:46116045-46116066 | TTTCAGTTCCATTTTTGTTTT | + | 6.1 | Nr2f6(var.2) | MA0728.1 | chr20:46116906-46116921 | TGAACTCCTGACCTC | - | 6.22 | Nr2f6(var.2) | MA0728.1 | chr20:46117404-46117419 | CGAACTCTTGACCTC | - | 6.24 | REL | MA0101.1 | chr20:46116074-46116084 | GGGGATTTCC | + | 6.02 | ZBTB18 | MA0698.1 | chr20:46116145-46116158 | TTTCCAGATGTTT | + | 6.28 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_10904 | chr20:46114035-46123570 | CD20 | SE_32514 | chr20:46114363-46119466 | GM12878 | SE_43391 | chr20:46115369-46116799 | MCF-7 | SE_43391 | chr20:46116885-46117327 | MCF-7 | SE_44071 | chr20:46114322-46117882 | MM1S | SE_58317 | chr20:46012297-46142322 | Ly1 | SE_58975 | chr20:46096568-46153547 | Ly3 | SE_59709 | chr20:46094742-46170079 | Ly4 | SE_60400 | chr20:46012252-46151621 | DHL6 | SE_62944 | chr20:46096399-46137613 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 46115774 | 46116729 | chr20 | 46115894 | 46116142 | chr20 | 46116511 | 46116614 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I047485 | chr20 | 46114675 | 46119292 |
|
Enhancer Sequence | TTGTTGCCCA GGCTGGTCTC GAACTCCTGA GCTCAGGCAA TCCACCTGCC TCGGCCTCCC 60 AAAGTGCTAG GATTACAGGC GTGAGCCACC GTGCCCGGCC AGAAATTAGT TTTTATTTTA 120 TTTATGTATT TATTCATTTA TTTTGAGATG GAGTCTCGCT CTGTCCCTTG GCTGGAGTGC 180 CGTGGCGCGA TCTCGGCTCA CTGCAAGCTC CGCTTCTGGG GTTCACGCCA TTCTCCTGCC 240 TCAGCCTCCC GAGTAGCTGG AACTACAGGT GCCTGCTACC ATGCCCAGCT AATTTTTTTG 300 TATTTTTAGT GGAGACGGGG GTTTCACCGT GTTAACCAGG ATGGTCTTGA TCTCCTGACC 360 TCGTGATCTG CCCACCTCGG CCTCCCAAAG TGCTGGGATT ACAGGCCTGA GCCAGGTTCT 420 TTATCAAACC TGCTTGTTTT TTGTTTTTTT TTGTTTTTTA TGATATTATT CTGTTTGCAT 480 ATTTTGGTAC CTTCTTTTGT GTCTTTAATA ATTATTAGCT CATCTTTCGA TGGTTTTTGT 540 GCAAACATGC TATTATCTGA AAGTACGCCT TTGCTTGCTG GGTTGACTCC TAGCTCCAGG 600 AGGATGATTT CTATATTGTA ATTTTGGATT ACATGAGCCC CAAGGCCTGA TTTCCTGCCC 660 TTGTATTTGC ATTGCATTAG GAGGTCTTTG CTTTCTGAGA CCCGTGACAC CTCCTCCTCT 720 GGCATAGTAT CTATCAGTTC ACACTACCGG TTGGGTTTCA GTTCCATTTT TGTTTTTTGA 780 CATGGGGGAT TTCCCTTTCT TTCCTGTGAA CCCTGTGATT CATTTAAAAG AGTACTTGTT 840 ATCTTTTACT CAGAATTTCC AGATGTTTTT GCGGGTGGGG TTGAGTGTTT CAGGCTATCT 900 AATCTGCTGT ATTGCTGGAA ACTGACCACC TTTGCGCTTT TTTTAGTTTC TTTTCTCTAC 960 CCCCTAGCTC TGAATATTCA GTTTCTGTTC TTTCATTTCC CACCCTACTC CCTCCTGTCT 1020 CATATATCTT TTATACCTTC AGCTTCAAAT CCTTTTCTTA ACAAGTTGAT TTACTCTGGA 1080 GTTTCTAATT TAAATGCATC CCAGGTGGCA ATCTCACAGG TCAACCTGGT TCCTGTTGGG 1140 CCAGATATTC TGGGTCCAGC TATCTCATAA ATCACTTGCC CTGCCCATGC ATTGGCTGCC 1200 CCTGGGGCTG ATGCCCATGT CTGACACAAT CAGCTGTGGT GTGAGCAGAA GTTGCCAGTC 1260 ACATGGTACC AAAGAAGGTG ACTTCTGCTC TGTCTTTAGA AGGGTCTGTG GGTAAGTGGG 1320 GCAGACATCA TGACTGACAT GTACAGTAAC ATCCTTAACA GGTTTGCAAT GTAGTTGATT 1380 GATAATAGCC AGAAGGTTTA AAATATTTTT TTTTTTGAGA TGGAGTTTTG CTCTTTTTGC 1440 CCAGGCTGGT GTGCAATGGC GCGATCTCGG CTCACTGCAA CCTCTGCCTC CCAGGTTCAA 1500 GTGATTCTCC TGCCTCAGCC TCCCGAGTAG CTGGGATTAC AGGCATGCAC CACCACCCTG 1560 GCTAATTTTG TATTTTTAGT AGAGACGGGT TTTCTCCATG TTGGTCAGGC TGGTCTTGAA 1620 CTCCTGACCT CAGGTGATCC GCCCACCTCG GCCTCACAAA GTGCTGGGAT TACAGGCGTA 1680 AGCCACCACG CCTGGCAAAT TTTTATTTTT TTTAAAGCTA GAATCTTAAC TTGCCTTATA 1740 CATTCACCTC TGGCATAGAT ACTGTTTGCA TGCCCCAACA TGGCTACTCC TTCCATGTTC 1800 CTACTCTGTA AGTACTAAAT CATTGATAGA GGGTTTGTCC TCTCAAATAA GCTTACTGTC 1860 ATCACTTTAA AACACTATTT CTTTTCTTTA CTTTTTTTTT TTTTTTTTTG AGACGGAGTT 1920 TCACTGTTCT TGTTGCCCAG GCTGGAGTGC AATGGCACGG TCTTGGCTCA CTGCAACCTC 1980 TGCCTCCTGG GTTCAAGCAA TTCTCCTGCC TCAGCCTCCT AAGCAGCTGG AATTACAGGC 2040 ACCCGCCACC ACGCCTGGCT AATTTTTATA TTTTTAGTAG ATACGGGGTT CCACCATGTT 2100 GGCCAGGCTG GTCTCGAACT CTTGACCTCA GGTGATCCGC 2140
|