| Tag | Content |
|---|
EnhancerAtlas ID | HS148-11278 |
Organism | Homo sapiens |
Tissue/cell | NHLF |
Coordinate | chr20:52406220-52406710 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GATA2 | MA0036.3 | chr20:52406636-52406647 | TTCTTATCTGT | + | 6.14 | | Gata1 | MA0035.3 | chr20:52406636-52406647 | TTCTTATCTGT | + | 6.62 | | SOX10 | MA0442.2 | chr20:52406343-52406354 | AAAACAAAGCA | + | 6.02 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_02652 | chr20:52406062-52408045 | Astrocytes | | SE_33779 | chr20:52405680-52408562 | HCC1954 | | SE_36429 | chr20:52405679-52408158 | HMEC | | SE_43381 | chr20:52398705-52412282 | MCF-7 | | SE_44320 | chr20:52405725-52408024 | NHDF-Ad | | SE_45892 | chr20:52405558-52408446 | Osteoblasts | | SE_47103 | chr20:52400216-52411240 | Panc1 | | SE_52186 | chr20:52405981-52406804 | Skeletal_Muscle_Myoblast | | SE_56621 | chr20:52405632-52408154 | u87 | | SE_63949 | chr20:52405981-52406943 | HSMM | | SE_64967 | chr20:52405612-52408332 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I053783 | chr20 | 52400368 | 52408332 |
|
Enhancer Sequence | TCATATGTGG ATGAAACAAC TGCACAGAAG TGCAATCTCT GTAAGCAGTG TGGATGCCTT 60
GTCATGGCAC TTTCTGAGTC TGCAATGACT CAGCCCATCC TCCACTTTTC TCCTGAATCA 120
CGAAAAACAA AGCATTCCTG CTGGCACAAA TGCATCCTTT ACATGCCCAT CCTGCCTCTT 180
TCTTCTTCCC ATTCACTCCA CAAGTAAAGT AATATAACTT GGGGTCATTT ATTGTAAACC 240
CAAGTACACA ATTAAGTGGG ATGTTTAGTT AGCATACGGA AATATTATGT TTAGATCATT 300
TGCGAAAGAG AATGGAAATG TAAACTACTT TCTTATAGGA AACTAAAACC CACTTAGCTA 360
AATGTTGAAA GCATAGGCCA AGGATGAGAC AGACTGAGCA AGTCAGAGCC ACAGTGTTCT 420
TATCTGTGAA ATGGAGGAAA TAATAGTTAC CCCATAGGTT GTAGTAGATT GAGTCAGAAT 480
AATGCAGGTA 490
|
