Tag | Content |
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EnhancerAtlas ID | HS146-09422 |
Organism | Homo sapiens |
Tissue/cell | NHDF |
Coordinate | chr20:49055200-49059640 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | + | 6.02 | BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | - | 6.02 | FOXA1 | MA0148.4 | chr20:49059080-49059096 | TATTAAGTAAATAATA | + | 6.23 | HOXA13 | MA0650.2 | chr20:49059361-49059372 | GTTTTATGGGG | - | 6.02 | HOXA13 | MA0650.2 | chr20:49059371-49059382 | GTTTTATTGGG | - | 6.62 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | + | 7.12 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | - | 7.12 | Mafb | MA0117.2 | chr20:49056274-49056286 | AGTCAGCATATT | - | 6.52 | NEUROG1 | MA0623.2 | chr20:49059581-49059591 | GACATATGTC | + | 6.02 | NEUROG1 | MA0623.2 | chr20:49059581-49059591 | GACATATGTC | - | 6.02 | Nr2f6(var.2) | MA0728.1 | chr20:49056841-49056856 | GAGGTCAGGAGTTCA | + | 6.22 | Nr5a2 | MA0505.1 | chr20:49056849-49056864 | GAGTTCAAGGCCAGC | + | 8.25 | RARA | MA0729.1 | chr20:49056841-49056859 | GAGGTCAGGAGTTCAAGG | + | 6.73 | STAT3 | MA0144.2 | chr20:49058321-49058332 | TTTCCCAGAAG | - | 6.62 | USF1 | MA0093.2 | chr20:49058365-49058376 | GTCACGTGACC | + | 6.14 | USF1 | MA0093.2 | chr20:49058364-49058375 | GGTCACGTGAC | - | 6.14 | USF2 | MA0526.2 | chr20:49058361-49058377 | CTGGGTCACGTGACCA | + | 7.69 | USF2 | MA0526.2 | chr20:49058363-49058379 | GGGTCACGTGACCACC | - | 7.88 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_00918 | chr20:49055454-49057748 | Adrenal_Gland | SE_00918 | chr20:49057773-49058639 | Adrenal_Gland | SE_03055 | chr20:49055477-49056538 | Bladder | SE_03055 | chr20:49057830-49058401 | Bladder | SE_31629 | chr20:49055402-49056597 | Gastric | SE_31629 | chr20:49056618-49057629 | Gastric | SE_31629 | chr20:49057673-49058675 | Gastric | SE_34001 | chr20:49055295-49058558 | HCC1954 | SE_35076 | chr20:49055128-49058839 | HeLa | SE_36034 | chr20:49054845-49058832 | HMEC | SE_42215 | chr20:49055461-49056626 | Lung | SE_42215 | chr20:49056844-49058813 | Lung | SE_48118 | chr20:49056153-49058331 | Psoas_Muscle | SE_51230 | chr20:49057316-49058890 | Skeletal_Muscle | SE_52679 | chr20:49055432-49058808 | Small_Intestine | SE_52679 | chr20:49059087-49060002 | Small_Intestine | SE_64485 | chr20:49055004-49058700 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 49055532 | 49055924 | chr20 | 49058248 | 49058472 | chr20 | 49057048 | 49057261 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I050438 | chr20 | 49054830 | 49059838 |
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Enhancer Sequence | TAACCCCGGC ACTTTGGGAG GCCACGACAG GTGGATCACT TGAGGTCGGG AGTTCAAAAC 60 CAGCCTGGCC AACATGGTCT CTACTAAAAA TACAAAAATT AGCCGTGCTT GGTGGTGCGC 120 ACCTGTAATG ACAGCTACTA GCAGGGGCTG AGGCAAGAGA ATTGCTTGAA CCTGGGAGGT 180 GGAGGTTGCA GTGAGCTGAG ATGGCGCCAC TGCACTCCAT CCTGGGCAAC AGAGCGAGAC 240 TCCATCTAAA AAAAAATAAA ATAAAGTATA TGTTTTAAAA ATTCAGAAGG TTTGGCTACA 300 TGGCTCCCAC ATTTTTACAG GACCATGATG GCTGCAGTGA GTTCCAGGTG CCTCCATAGA 360 TAAAGCGTGT GTGCCCGAGC CTGTCGGTCC CCTGAGACTG CCTCCCTCTG TAGCATCAGC 420 CAGCCAGTCC CCGCAGGCAC CTGAGCAATG ACTCAGGCAT GAAGGGGATT CTTTGGAAGT 480 TCCTGGTGAG AAAGAGAACC GGGTGAAAGT GTGGCCTGCA GGAGTGGCCA ATGAGGAGCA 540 AAGAGGAGGG TGACACCCGC CTGTGTCAGC TCCTGCTCAT CATCTCCCCA GTGGGAGCCT 600 CCTGTGCACT TTCCACAGGA CCGAGTGAGC CACTCTTGAT TCACCCTTCC TCTGCCCAGG 660 CCTGCAGTGG GCGGGTGCCC ACCGTGGTAC ACAGCCCATG AAGCAGCCAC CCTCTGCCAC 720 TGAGGCTTGG CAGTCTGAAT GGATGCCAGC CTATGAGATT AGAAGGAAAA TGGGCAGGAT 780 GTGAAAAATC AGAAGCTGCC TGACTACTCC TGGGAAATTG TTCCTGAGAC CATGCCCTTC 840 CTGCGTCTAC TTGTAGCATC GCTCTTTCAC TGACAAGCAT GTATCGAGTA CTAGGCAAGT 900 CCAAAGGAGG TCTTGAAGTA GATACAGCAG GACAGGCAAG AGGCTGGTTC CATGGCCAGC 960 TGCTGTTTGT ACCTGACCAA TGTTCCTCCC CCATGTTCCG GTAACAGCAC CCTTCCACCA 1020 CTATCACTCC ATGTGCCTCC CCAACCAGAG GAGGTGGATG AATGAGGCCT GGGAAGTCAG 1080 CATATTCCAT CCCCCCGGCC CCAGGGATTG GTCTGAGATG GGTATGTGAC CCAAGTCTGG 1140 CCAATCACAG TCAACCCCTA GACATGTGCT GAGGCTACAC AGAAAGTCAG CTTCTGCTCA 1200 CTTGGCTTGT CGATCTGGCA GAATGGAAGC TGGGGGATAC TGGGGACTAT TTTTGCCACC 1260 ACATAAGGTG ACCCTAACTG ACACGGAGGA AAACAGAACC AAGAAGTGGA AACAGCATGA 1320 TTCCTAAACA ACAGATGCAC ACCTGGATCC AGCCATTCCT GAAGCTGAAG GTCTTTTCAT 1380 TTAAATGAAC CAAAACATTC ACAGAAACAC ACACTATTTT TTTTCTTAAG TCACTTTGAG 1440 TTGGGTTTGT TTCTGTCACT TTCAACCAAA AGACCCTGAC TATACAAGTG GATGTATAGC 1500 TGTTTCCAGG CTGGAAAACA AACAGCTATG GCAAAAGCAG ACCATGAGAC ATCCATGTAA 1560 AATCTGGGAG TTGAGGGCTG GGTGCAGTGG CTCACACCTG TAATCCCAGC ACTTTGGGAG 1620 TCTGAGGCAG GTGGATCGGT TGAGGTCAGG AGTTCAAGGC CAGCCTGGGC AACATGGCAA 1680 AACCCTGTCT CTACTAAAAA CACAGAAATT TGCTGGGCGT GGTGGCATGC ACCTGTAATC 1740 CCAGCTACTG GGGAGGCTGA GGCACAAGAA TGGAGAATTG CCTCCCTCTG AACTTTTTAT 1800 TTGGTGCTAT AAATAAACCC TTTCAGGTCT GAGCGGCAGT CAGGTGGATT TCCAGTTACT 1860 TGCAGCTGAA TGCATTTCTA CCTGTCACTC CTCCTCAGGA CCATAGGTTG CTCTGGATTC 1920 CCACCACACA CGTGGAGATA CTGAGGTCTG GAATGCAGAG AAAACTTCCC CAGTGTCACG 1980 TGGTGGAGTC ATGAGTTTAC TGACTCACTA CCCAGTGCTC TTTCCGCTCA AGACAACCTC 2040 GTGGTCCGTT CCTTTCATTC GGGCTGCTGT ATGCATGGCC AACAGCTGCT TTGTAAATTA 2100 AACACTTCCC ATGGAGGCAG TGATGATGAT GACCTTGCCC CTGAATCTTT CCAGCCTCTT 2160 ACGTAAATCG CCCCTGGGTC ACTGTCTCCA TGCCTTTGGA CCCAGGACAG CTTCCCCACA 2220 TCCTTTAAAA CGATGAGATA ACCACATGTA AACCCAGTGC TCCTGGAAAG GTGTGAGTCA 2280 TGCATCACGG AACAGAAGGT TCACAGCCAG GAGTCCGCCT ATCATGCTTG TCATCCAGCC 2340 TTCCAGGCTT GCGTGGAGCT TGTTCACTGC AAAGCTGATT CATCTGCAGC TTGTGGTCAG 2400 CTCTGACACT CAGATCATTT TCTGCTCATC TTGTGCCTGG CTAGTGACCT TTAATTAGGT 2460 GCTGTCAACT TCCTGTCTTC CTGTCTCTGT CCATGTTGTC TTTCCCCCTA TTTTAAAAGG 2520 ACTGTATGAA TACTAAAGAC ATGATGATGA TGATAGCAGT TAGCACTTAC TATATTCTAA 2580 ATGCTCTATA TAAATTTAAA AGTTGTTTCT CAAAAGCCAT TGTCTGAGAT AACTAGTATT 2640 ACTATTGCAG TTTTATGGAT TGGAAAACAA GGGCTTAGAA AAGTGAAGTC ACTTTCCTTG 2700 GGTAACAGAG CCAGGAGTAT TTGGTGGAGC TGGAATATGA ACATGAGTGT GTTGGACCCT 2760 GGAGTGCAGC TCGAAAACAC AAAGCCAGTT GAGTCTGTTA AGCTAGCTTC AGAGGCTCCA 2820 CTACAGCAGT TTAGACTCTA ATTACATTTA CTGTTTGTTT AAAAGACTTC TGGACAGACT 2880 GGAGACCTCA TGGTGTATTT GTCATCTTAA GGTTGTCATA AAGGACCCAC AGTCTTTGCA 2940 CTTTCCCTCT CCTCCGTCAA CAGCAAGTCA GCAACTTGTC CTCAGTCTGG TCTTCACATC 3000 ACAGATGGCT GCCACAGCTC ACGCATCACC TCTTCACACA ACAATGTCCA AAGCAGGCAG 3060 AGAAGGAAAG GGGCAAATAG GTTTCTCTTT ATGTGCCTCT TTCTTGTCAT AGAGTAAACT 3120 CTTTCCCAGA AGCCCCCAGA TTAGTTTCCC TTTGGACAAA ACTGGGTCAC GTGACCACCT 3180 CTGAGCCAAT CGCAGGTCCA GGAGAACAGG GTGGCTATGA CTGGGTAAAG CAAATGCAGT 3240 TTTTCCCCTA GGACTAGGCA CATGGCCAGC TGCAGAAAGT CAGGGTTTTC TCAGCAGGAA 3300 AGGAGAGGGG AATGGCAGTT GACAAGGCAA CCCGCAGTGT CTGATACCCC AGCATTTAAA 3360 AATGTTTAGC ACAGACACCC ACGTTGATTT GCAATATGAT TGTAGGTGGT ACATGAAGTT 3420 GTGGTTGCGT GTTTTTAAAT AATTTTAGTA TTTATTAAGT ATTTAAATGC ATTTGAAAAA 3480 AACATATAGG CCAGGTGTGG TGGCTCACAC CTGTAATTCT AGCACTTTGG GAGACCAAGA 3540 CTGGCGGATC ACTTGAGGTC AGGAGTTCGA GACCAGCCCG GCCAACATGA TGAAAACCCA 3600 TCTCTACTAA AAATACAAAA ATTAGCCAGG CGTGGTGGTG GTGTCTGTAG TTCCAGCTAC 3660 TCAGGAGGTT GAGGCAGGAG AATCACTTGA ACCTGTGAGG TGGGGGTGGA ATGAGTCCAG 3720 ATCGTGCTAC TGCACTCCAG CCTGGGTGAC AAAGCGAGAC TCTGTCTCAG GAAAAAAAAA 3780 GAACCAAAAC CATATATATG GCTATCTCAT CAATCAGAAC CACAACAACT ATAAAACAAC 3840 TATATTTAAG GTTTTTTGCA AAAAAAAAAG TTAAAGAAAA TATTAAGTAA ATAATAGATC 3900 ATTTGCTTCA AGATTTGGCA AATGTAAGGA TAGGAAACGC TGTTCTATGT TATCCTGCTT 3960 GGCCTTTTTT CCAACTTCTC AGAGGCGTTC TGCCTTCAAA CTCCCTCTTG AGGAAAATAA 4020 ACACCCACAA AGATTTTTGC ATCATCTGCA AATATGATTC AAATAAAGCC TTGAGCTCAA 4080 ATATAATCCA GGCTTCCTCA GCTGGGAAGG ACAGGCATCT CGAGTCCAAG CCTTTCCTGG 4140 TATTTCACCT CTGTCTTCAT GGTTTTATGG GGTTTTATTG GGTCTGTCCC TCCTCTGGAA 4200 AGCCACCACA AATCCGATTT CTGAGAGAAC AAGATATAAA TAATAAACAG AATGACTCCT 4260 TGAGATTTCT TGTCCTTGTG AGGAATTTTC AAACGTTCCT AAGACATGAA ATCTTTTCGT 4320 TTAAACAAGA GTTTGGGAGT CCGTCATGAG AACTGGATAA ATAATGGCCC AGTGACACAG 4380 GGACATATGT CAGAGCCTTT GTTCAAAGAA ATAAAGTAGC TCAATATGTG CCGATAGCAA 4440
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