Tag | Content |
---|
EnhancerAtlas ID | HS146-09138 |
Organism | Homo sapiens |
Tissue/cell | NHDF |
Coordinate | chr20:10584040-10585630 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CDX2 | MA0465.1 | chr20:10584461-10584472 | AAGCAATAAAA | + | 6.32 | JUN(var.2) | MA0489.1 | chr20:10585455-10585469 | ATGAAATGAGTCAT | + | 6.02 | RARA(var.2) | MA0730.1 | chr20:10584477-10584494 | AGGTCAAGTAAAGGTCC | + | 6.85 |
|
| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_00583 | chr20:10584115-10587046 | Adipose_Nuclei | SE_01562 | chr20:10584088-10585458 | Aorta | SE_26578 | chr20:10584098-10585467 | Esophagus | SE_33796 | chr20:10583957-10586330 | HCC1954 | SE_41211 | chr20:10584121-10585619 | Left_Ventricle | SE_42434 | chr20:10584086-10585556 | Lung | SE_45665 | chr20:10582060-10586913 | Osteoblasts | SE_48730 | chr20:10584070-10585462 | Right_Atrium | SE_52031 | chr20:10584037-10586693 | Skeletal_Muscle_Myoblast | SE_52858 | chr20:10584177-10585472 | Small_Intestine | SE_63853 | chr20:10584037-10586693 | HSMM | SE_65053 | chr20:10584792-10586191 | NHEK |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I010603 | chr20 | 10584128 | 10586693 |
|
Enhancer Sequence | AGGACTTCCT AAACATTGAG AATTTTCATT CTGAAACTCT CACCGGTCTA AGCCTTTTAC 60 ATGAGTGAGT TCAGTTTCTT TATCTTTAAG ATGTTCTGAT AACCAGTGAT AACATGACCA 120 GAGTTAACCA CATTAACTTA TGAGGAAAAT GCCATTTCCA TCATGAGGCT CGTTCCTTGT 180 TTTGAGTGAT TGTCTTTAGT TGTGGTCAGT TTCTGTCTCT TCAGTTGCTC ATTTACTCCA 240 CCTCTGTCTC TTCACATATA CATTTTCCCA GCCACATATG TCAGCTAAAG CCTGGCACTA 300 CTCAACAGTT TCATCTCGGG GCTCAAGCTC TGTGCGTCCC TCTGCCTAGC CTGCTCACCT 360 CTGCCACCTC CCCTCCTCAC AGGCCTCCAG CCCACTACTT CCTCAGGCCT GTTGTTACTA 420 GAAGCAATAA AAGACCCAGG TCAAGTAAAG GTCCCTCTCC CACAAATGAC CCATCAAGCC 480 AACTACACCA TCCTTCCACC AGAAGTGTCT TGTAGTTTAA TTCTCATTGA TATTTGACCT 540 CTACAGAGTC TGCCTGTCTC AGCTATTTAA GGATCAATAA ACAGCCCTTC CCTTCCAGAA 600 CTGCCTTCTG CCTGAGAGAA GGCATTCTTA TCACTTGTTC CATACTTCAA ATGCCCACAG 660 CCAGTGATGT CAGGCTCCTG TGAGTATTCC CTGGACTTGC TTCAAGCTTT GAATTCTTAT 720 ATCACTTTAC ATGGATATTC ACCAAAGGGC AGGATCCATC TCATTTTCTC TGGATAGCAA 780 TTCTCAAGAA CATCTGACTG GGCAAGGCTG GGAAAATTGG TACCCGCAGT AGCTATGTTG 840 GAAAGATTTC TTTGGCAATA AACTTCAGTT GTTTTTGTAT AACTATTGAC TTAACTCACT 900 CTTCTGCAGC CACAGAAGTG ACAGAGGAGT GAACTAGTAC TTGAGCAACA GCCTGGGTGC 960 CTTACTCGTG CTGTAGCCTT GAGAGCACAC ATTCCCTTTC CTTCATCTTT TTTTTTGGAT 1020 TCTCAATGTC TAAGTGACAA TTTGTTAGGA AATCTGGGAG CGTCTATTCA AAACTCCTCT 1080 GTCAAGGGAT TCTTTCAACC TGTAGACAAG GAAGCCAGCT GCACTTAGCT CCCCAGTACT 1140 TAAAGGTGGT TGCACAAAAG AACTGCTGTT CCAGATCAGG CAGTACAAAG GGAGTAATCC 1200 CCCTCCTTTA CGGAGCAGAG CGAATGCAGC CACGCTGCCC CTAAGCACCA CAGCGCCAGG 1260 GAGGTCTGTC CCTGCTGTCA CTGTTGCGTT TCTCTTGTCC ACTCAGGGAC TTTGGTGCAG 1320 GGAGATCCTC TGTGTTGCAA TAGCTCTGCA CAGAGTGCCC ATGTGCTAGG GATGTGGGAA 1380 TTGTGATGTG TACTTTGGGA AGAAAGGACA TTATTATGAA ATGAGTCATT GTATTTTTCT 1440 TACTAGAGTT TCTCATAAGA AATCTAAAAA CTCTTGTAGC CTCAGTTTTT GACCTATTGC 1500 TAGATATAGG ACTGGGGAGT CTTTTGAGAG TTTTTACCTT TATTTGGTTT GTTTTTTCCT 1560 CACCGTTTTT TTCCTTGGAA ATATGAAGAA 1590
|