Tag | Content |
---|
EnhancerAtlas ID | HS146-07555 |
Organism | Homo sapiens |
Tissue/cell | NHDF |
Coordinate | chr19:18134220-18135120 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr19:18134495-18134516 | GACCCTGGCCATGGTGCTTAG | - | 6.57 |
|
| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18134051-18134890 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18134083-18135538 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18134027-18135598 | Right_Atrium | SE_50498 | chr19:18134019-18135509 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18134074-18135718 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18133825-18135230 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
|
Enhancer Sequence | TTGGTGGCCA GCAGTTGTCC ATTAATGTTT GTGATACAGG TGAACCAGGC CACGTGAAGC 60 CTTGAACCGG GGCTGAGAGC CAGCGCTTTC TTTTGGGGAC ACAAAACAGG CAGGATGGGC 120 AGGGGGTGGT GAATAGAAAA GATTGGGTAC ATAAGGCAGA AGAGCCTGGG GCTTTATAGG 180 GGTGGCCCCT GAAGCCTGTG ACCCAGGAGG GACCAGGCCC AGGCCACAGT CCAGGCAGGA 240 GAGGGCGTGT CCCCATCTGT GAACCCCCAC CCCCAGACCC TGGCCATGGT GCTTAGGAGG 300 GAGGCAGCAT GGAGCTTCGG GTCTGGGCTC TGGGACCACC TCTTCCTCCC TGTGTGACCG 360 TGGGCAAACG ACAGCACCCC TCTGAGCCTC AGTTTCCTCA TCTGGAGCTT GACTTCACTG 420 TACGTCAGTG TCAGGACTGG GCACAGAGTG GGTGCAGCGT CTGTGGGGCA GCATGGGGGT 480 GCTGAGGCAG TGGGTGAGGG GTAGGCTCGT CTGGAACATG CCGTTAGCAG TTCCCAGCCT 540 CTTTGAAAAC AGGAAACCGG CTCTCATGGG AGCCCCCAGC TGTGCTTCCT GAGTCTCCGC 600 GTGACGTGCG CGTGCTGGGG CAGTGTGGGC AGGCATGTGT GTGTTTGCGT GTTTGCAGGC 660 GGCCTGGAAT ATAGGTGGAT CCGCCTGCGT GTGCATATGT GTGTGTGTGT GTGTGTGTGT 720 CGGGCCGCAC GTGGCATTGC CCAGAGGCAT GTACACACAC AACCGTTACC TGTGCTCGCA 780 TGTGGAGCTA TGGATCTCAG CCAGTGTGGG AAGCAGACAG TGGGTTGGTT GGGGCACTTT 840 TGAGTCTGGG TCTAAGTGTT AAGTCTGTGT GTCCGTCAGC AGAGGTGACT GGTGTGTGCT 900
|