Tag | Content |
---|
EnhancerAtlas ID | HS146-01170 |
Organism | Homo sapiens |
Tissue/cell | NHDF |
Coordinate | chr1:201429560-201431680 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
REST | MA0138.2 | chr1:201430598-201430619 | GCAGCTTTCCCAGGTCCTGGA | - | 6.42 |
|
| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_00341 | chr1:201428725-201440137 | Adipose_Nuclei | SE_02688 | chr1:201429275-201432569 | Astrocytes | SE_03836 | chr1:201430236-201431672 | Brain_Angular_Gyrus | SE_04842 | chr1:201428247-201434202 | Brain_Cingulate_Gyrus | SE_05817 | chr1:201428180-201433341 | Brain_Hippocampus_Middle | SE_06742 | chr1:201429914-201439788 | Brain_Hippocampus_Middle_150 | SE_07798 | chr1:201428643-201434118 | Brain_Inferior_Temporal_Lobe | SE_25848 | chr1:201430010-201431771 | Duodenum_Smooth_Muscle | SE_26585 | chr1:201428837-201440206 | Esophagus | SE_28254 | chr1:201429734-201431901 | Fetal_Intestine | SE_34202 | chr1:201429005-201432731 | HCC1954 | SE_34751 | chr1:201428786-201432775 | HeLa | SE_35910 | chr1:201428639-201432753 | HMEC | SE_37871 | chr1:201428696-201439837 | HSMMtube | SE_45671 | chr1:201428353-201432948 | Osteoblasts | SE_51555 | chr1:201428952-201432873 | Skeletal_Muscle | SE_52053 | chr1:201429453-201432803 | Skeletal_Muscle_Myoblast | SE_54518 | chr1:201430102-201432705 | Stomach_Smooth_Muscle | SE_55901 | chr1:201421780-201432740 | u87 | SE_63790 | chr1:201429033-201432511 | HSMM | SE_64619 | chr1:201429152-201432679 | NHEK | SE_65522 | chr1:201429224-201431952 | Pancreatic_islets | SE_67648 | chr1:201421780-201432740 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I201459 | chr1 | 201428391 | 201433903 |
|
Enhancer Sequence | TCCACCCTTG TTTCAGGACT TGGCTCCAGT CATCCTCTCC ATGAAGCCTC CCCTACCCCC 60 AGCCCACAGA CCATTCCCTT CTCTGCCCTC TCGGGGCTTG ATCCTCACCA ACTCTCTCTC 120 TTCTGACCTC CTTTCTCCCA GCAAAATGCT GGGTTCATTC ACTTACTTAT TTACTCACAA 180 ACAGTAAGAA TCTATTTGGT GTTGGGTTAA GAGCACTTAC CTAGAGTCCC ACTGTGACCA 240 CATTGACTCC TGGCTCCACC ACTTAGCTGC TATGTGACTC TGAACCAGCC ACTTAACTTC 300 TCTGGGCCTC AGTTTCTTAA TGTAAAATAT GGGAGTCGTG ATAATCGCAC CTACCTCACA 360 GGGTTGTTGA AACGTTACAT GATTTAAGAA TTGTATAGGC TGGGCATGGT GGCTCATGTC 420 TGTAATCCCA ATACTTTGGA AGGCTGAGGC AGGTGAATCG CTTGAGCTCA GGAGTTCAAA 480 ATGATGAAAC TCCATCTCTA CAGAAAATAC AAAACCAGCT AAGCATGGTG GTGCACGTCT 540 GTGGTCTCAG CTATTCAGGA GGCTGAGGTG GGAGGATCAC TTGAGCCCAG CAGCAGGTCA 600 AGGTTGCAGT GAGCTGAGAT CATGCCACTG CAGTCCAGCC TGGGTGACAG AATGAGACCC 660 TGTCTTAAAA AAAGAAAATT TTTTTTTACA GTTCTTGGGT CAATATCTTG CACGGAGTAA 720 ACACTATATA CCACTTGTCA TTTTTATTAT TAGAATCTAC TATTTGCCAG GTACTCTGAG 780 GCACCAGGAA TATACAAATA ACAAGTGCAG AAACTGACCA GTCTAGTTGG ACAGGCAGAC 840 GCATAAATCA GCAATCACAA GGCAGTGTGA CTAATAGAGG AGGTATGGCA GCACAGAGAG 900 AAGTGAGCAG TTACTCAGCC TGCCTTGTAG GCAGGGCACT CAGAGAAGCT TCTCAGAGGT 960 GGTGACATGA GAGAGAGCTG AGCCAGTGAT ACAGAAGCAT GTAGCAAGAG TGGGGGTACA 1020 CTGGCCTGGC AGTGTGAGGC AGCTTTCCCA GGTCCTGGAA TGGGGGTGGA TTGCATGCTG 1080 GGGCCGGGCG TGGAGCACGT AGAGACAAAC ACTGGAGAGA TAGCCCTGAT AGTGGAGAGA 1140 AGACCCTTTT GACAAGTGGG CATCCTCCCA ATGCAGTGGG GAAAGCGCTG GCAGTTTTAG 1200 CAGAAGAATG AATTGAATTC TGGACAGATC ACTTCGGTGA ACCATGGTGG ACCCACTGAG 1260 GCAGGAGACT GAGGGAGGTG AAACCAGGGC TCTCTGTGCA GCCTTACAGT ATGTTCCTGT 1320 ATAGCCAGTC TTGCCAGGGT CCTTGGGTCC TGGCCCTGGT GTGACAGCTG CCCACAGTAC 1380 CTATACATCC CCAACAGACT TCAGGATTGC ACACGGTAAC GCCCTGTCTA TCTGCCCCTA 1440 CTCCTTCCTG CTGCGATTCC AGCTCATGGA CTCTCACTCT GGCTCTCCTC ACTGGTCTCC 1500 ATTCTCACCC TTGCAACAGG CTCACTCTTG CTAAAGCCTT AGCTCCCAAC CCCAGCTCAC 1560 CCTGACCACA GCAAGCCCAT CCCTTCTCCC TCGGTCTCCC CACCCCACCT CATCGGACTC 1620 CCAGCTGCCT GGCTGAGACT TGCCCTGTCT CATGTTCCCA TGGATGACTC ACGTATCGGG 1680 TGGGGGTGAG GCCACGCTGG GGCTGCCGAA GCATGGGGAG AGTTGGTGGC AACAGCCCTT 1740 CCCTGGCCTC ACAGGCCCAA CTGAGCAAAG GTTTTCCATC TCATGCATGT CTGCTGGCAC 1800 TATCAGAGCC TGTTTGTGCC CCCAAAGAGG TCTTGACCCT ACTCTGAGGT CTAGCCAAGC 1860 CTTCCCGGGG TAAGGGCCTT TGCTCCTTCT TGGAAATTCA AAGTCATGAA AACCAGAGCA 1920 GTGAGAACAC CCGTGAACCC AGGAAGCAGG ATGGCCCCTC CTCCATCAGA GAGGCAAAGA 1980 CTCCCCAAAG AGGTCACGGA TCTTTTTTAA AACCTGGTCT TAGCCGGGCA CGGTGGCTCA 2040 CGCCTGTAAT CCCAGCACTT TCGGGGGCCA AGGCGGGTGG ATCACAAGGT CAGGAGTTCG 2100 AGACCAGCCT GGCCAACACA 2120
|