EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS146-00477

Organism

Homo sapiens

Tissue/cell

NHDF

Coordinate

chr1:46648460-46649860

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:46649391-46649410

TTGCCAGCAGGTGGAACCT

6.1

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_23257	chr1:46648290-46652274	Colon_Crypt_1
SE_24097	chr1:46648311-46650828	Colon_Crypt_2
SE_31897	chr1:46645550-46652335	Gastric
SE_34180	chr1:46645443-46651019	HCC1954
SE_41846	chr1:46645690-46648609	LNCaP
SE_41846	chr1:46648685-46648984	LNCaP
SE_41846	chr1:46649005-46651848	LNCaP
SE_50730	chr1:46644589-46652277	Sigmoid_Colon
SE_65807	chr1:46648144-46650755	Pancreatic_islets

Enhancer Sequence

GTGTTTTTGT TGTTGTTGTT GTTGTTGTTT GTTTCTTTGA GACAGGATCT TGCTTTGTCA 60
CCAAAGCTGG AGTGCAGTGG CATGATCATG GCTTACTGCA GCGTCAACCT CCTGGGCTCA 120
AGGGATTCCC CTACCTCACT CAGCCTCCTG AGTATCTAGG ACTACAGGAG TGTGCCACCA 180
TGCTCAGCTA ATTAAAAAAA ATTTTTTTTG TAGAGGCGGT CTCACTATAT TGCCCAGGCT 240
GGTCTCGAAC TCCTGGACTT AAGTGATTCT CCCACCTCTG CCTCCCAAAG TGCGGGGATT 300
ACAGGCATGA GCCACTGTGC CAGTCCTGAA CTAGTCTTTA TCCCTGTATC TGGAGGAAGC 360
AATAGGATTC CAGGGATTTG GACAGGAGAG GCTCTGCCCT GAGAGGGTTA AAGGCAAATC 420
CGGTTTGATT TCTGGCCTCT GTTACCCAGA CCTTGCCAGG CTGGGCAAAG CAGGATAGGG 480
CAGACCTCCA GCTCCATGAA ATTTGACCCT GCAGGCTAGA AGTCCAGCTT TCTGTCCTTG 540
GGCAAACATG CCTGGAATCC AGCCACAATC TGCCACCTCA CTTCCCGTTC TAGCCTCAGT 600
TTTTATAGCT GGCAAGTGAG GACTAGTCAC CAAGGTGGTG TCAGGCTGAT TCATCCACTG 660
AAGCCCTGGG CCGGGAGGCT TTCCTCTAAG ATCTGTGGGA ACTGCGCAGG GCCCTCCTCA 720
ATCTAGGCCT CAGAATTCCC CCTGAGGTTT GGAGTTGAGC TAGACAGCCT TTAAGAGAAG 780
CTCTGGCTGT ATTCCCACTG GTACCTCACT TTCCTCTTGT GAGGCAAGGA GGTCTTGTCT 840
ACATGAGGGG CGGGCCTGAA GTTGGATTCT GGAGGGGAGC CAAATGGGGC CTCAGGTGGG 900
TGAACCTTCT CAACCTCCTC CCTCTCCAAG GTTGCCAGCA GGTGGAACCT CAGCCTCGCC 960
TCCATTACTA TGGTGACTAT TGAGCCTGTT CTGCTACCAC CCCCGTCTCC ACCTATCAGA 1020
GGACAGAGGT GTTCTAGGCA CCCATAGCCC AGAAAGGAAA TAGGAGGCTG GGCCCTCACC 1080
TGCCTGTTTT CAATCCTAGC TATGTGGCAG GACCCTGGCA GCAGTGAGGG AAAGTCTTGC 1140
CCCTCTGCCC ACCCTGAGGA TATTTCTAGA ACCCCTGATC TCCTTTATAT CTGCCCAGGT 1200
GTGCAGCCTG GTCCTAGCTA TGCATATCCC AGCTCCCATT TTTCTGGCTC TAGAGGATGT 1260
TTCCCTCCTT ACAGGATGAG GTTTTAGACT CCCTAGCCAA TAAAGAGGGA AGTTTCTCGG 1320
CTCCCATCCT TCTTACTCAG CTGTGTGGTA GTAAGCTACT TGCCAGCACT GTTTAAGGCC 1380
TGCCTGACCT CTCTCTCCCC 1400