| Tag | Content |
|---|
EnhancerAtlas ID | HS146-00271 |
Organism | Homo sapiens |
Tissue/cell | NHDF |
Coordinate | chr1:25891700-25893330 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr1:25892455-25892473 | TCTTCCTTGCCTCCTTCT | - | 6.29 | | RREB1 | MA0073.1 | chr1:25893015-25893035 | CCCCACCCCACCCCCACCCC | + | 8.54 | | ZNF263 | MA0528.1 | chr1:25892451-25892472 | TTCCTCTTCCTTGCCTCCTTC | - | 6.15 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_02010 | chr1:25890927-25896559 | Aorta | | SE_03472 | chr1:25890604-25897057 | Brain_Angular_Gyrus | | SE_04384 | chr1:25883710-25897130 | Brain_Anterior_Caudate | | SE_05146 | chr1:25875255-25899602 | Brain_Cingulate_Gyrus | | SE_05991 | chr1:25873945-25899913 | Brain_Hippocampus_Middle | | SE_06990 | chr1:25882590-25898188 | Brain_Hippocampus_Middle_150 | | SE_08141 | chr1:25882606-25897422 | Brain_Inferior_Temporal_Lobe | | SE_15269 | chr1:25881504-25892507 | CD4_Memory_Primary_7pool | | SE_16249 | chr1:25886217-25892811 | CD4_Naive_Primary_7pool | | SE_17633 | chr1:25869448-25897028 | CD4p_CD25-_CD45RAp_Naive | | SE_19031 | chr1:25874010-25893424 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_53664 | chr1:25874991-25896829 | Spleen | | SE_55600 | chr1:25891316-25892611 | Thymus | | SE_65397 | chr1:25887914-25896024 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I025565 | chr1 | 25891281 | 25897035 |
|
Enhancer Sequence | AATGCTAGCT TCCTGTGCTG GGTAGGGGGC CTGGTGTGCG TGGGCTGGCC CTGCTGCCCT 60
TTCTCCTGGG GACCTTTCCC CTGATTAAGA ACACAAGCCA CTCAGACCCC CTCCAGAGCA 120
ACAGTCCCAT CCCTCCACTC AAATGCTTCC AGGGGCAGGG AGCTCACTGG GGAGGAAACC 180
CCTTCCAGCG TTGTCCAGAG CTGTTAGAAA GTTCTTACTG TTGAGTCAAA AACTATTCCT 240
GGTGGCTGCT CTGCCGCAGT CTGAGGTGAG CGAAACACAC TGCAGCTCAA GTTGATTTCC 300
TCCGACTTGA GGAGGCGTGG CCTTCAAAAA TGGGCTTTTT TTTTTTTTTA CAGGCTTTGC 360
TCCCTCCACA GGTCTGTGTT TATGAACAGG GGAAGGGAGA AAGTGTTTAA TGAAGCTCGT 420
GAAGCGTTCC ATAGCAGGGA AGGTCAGGCA CAGTGAGGAG GTGTTTTGGT ATAGCCTTTG 480
GTGGCATTTC CCCGTTTTCC CAGGGGCCAT CCTTGTGGCC CCCTGCAGCT TGGGGACATG 540
CCACTGAGAA GGCTGTGGCT GAGGAGAGGC CTGGGCAGGT CAGGGTTCCG AGCCCTGGGT 600
CCCCGTCTGT CAGGCCTCCC TTTCTCACTT GAGACCCTCA GCAGCCTCCT ACAGCCCTCC 660
CACATCAGGG GCTTTGTTTG GGGTTGGAGT CAGCGATTTT TGGTCCAGCG GGTGGGGACA 720
GAGTCAGGGT CTTTGCCCTC CTGCCTCCTC CTTCCTCTTC CTTGCCTCCT TCTTGCCAGG 780
GACTAGTGGA AACCCCTTGG TCCAGCCTGG GGCGAGGGCG ACAGTGACAC CTTCCCTGCC 840
TCACTGGCTG ACGACACCTG CCCTCTGAAG AAAATCTTTT GTTTGCTTTC TCCACATTAT 900
TTTGAGCATC ATGTGCCCTT TATTAACAAT TTTGAAAATC AGCAAAGCAT TAAACAGAAA 960
GTAACACCAT CCTGTAATCC CACAGCCCAG AGTTTTGGGC TTAATTCATG CTAATCCTAT 1020
ACATATACAT TATTTTGCAT TGATCAGCTC ATCGTATTTG CATTTTGGGA TCCTGATTTT 1080
TCACTTAACA GCGATGTGTC AGAAGCATTG CTCCAGGCTG TTAAAAGCTC CTCGTAAACA 1140
CCTCTTCCAT TGACTGCCTA ACATTCTCTT AAGGGAAGCT GCTATAATTT ACTTGACTCT 1200
CCCCTATTCT TTTGGACATG TAGGTTGTCT CCCTTTGTAA ATTTATTTTT CGAACAGCAC 1260
GGTGTTGACA CAGTTATAGC CAAAGAATCT TCCGTGTTCC CTCCCACAGC TTGTTCCCCA 1320
CCCCACCCCC ACCCCCGCTG CTCCCTTTAC CAGCCCCTTC TCCTCTTTCC TGGGCATGTC 1380
CTGACTGAGC TGGGGCACAG AGTGGGTGCT CTGGCCTCTC CCGGGGGTGG GTGCACCGCT 1440
GGCTGCCCCT GACTTTTCTG AGCTGTTTGA CTCTCAAGGG GAGGTGCTTT GATCTGAGGT 1500
TACTCCACCT CCCCTGCACC GGGGGCTTCC TTCTTGGGCC ATGTGCCCTG CTGTTCCCCA 1560
CTGGTGCCCC CTCGCGTCTG ACCCTGGGGC GCGCCAGCCC TCACCCAGGC TCTCGGCTCA 1620
CACAGCTCTG 1630
|
