Tag | Content |
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EnhancerAtlas ID | HS146-00083 |
Organism | Homo sapiens |
Tissue/cell | NHDF |
Coordinate | chr1:11967780-11969340 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nkx3-2 | MA0122.3 | chr1:11968331-11968344 | TTTAAGTGTTTTA | - | 6.33 | ZNF143 | MA0088.2 | chr1:11967995-11968011 | TACCCACAATGCATTG | + | 9.63 | Zfx | MA0146.2 | chr1:11969285-11969299 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_04401 | chr1:11967802-11970392 | Brain_Anterior_Caudate | SE_05426 | chr1:11967459-11970702 | Brain_Cingulate_Gyrus | SE_06308 | chr1:11966827-11970789 | Brain_Hippocampus_Middle | SE_07453 | chr1:11967402-11970810 | Brain_Hippocampus_Middle_150 | SE_08423 | chr1:11967438-11970628 | Brain_Inferior_Temporal_Lobe | SE_10739 | chr1:11967490-11970531 | CD19_Primary | SE_13010 | chr1:11967686-11969397 | CD34_Primary_RO01480 | SE_13630 | chr1:11967645-11970731 | CD34_Primary_RO01536 | SE_14236 | chr1:11967710-11969205 | CD34_Primary_RO01549 | SE_14675 | chr1:11967367-11971255 | CD4_Memory_Primary_7pool | SE_16078 | chr1:11967699-11970381 | CD4_Naive_Primary_7pool | SE_16518 | chr1:11967714-11970388 | CD4_Naive_Primary_8pool | SE_21206 | chr1:11967365-11970416 | CD8_Memory_7pool | SE_21842 | chr1:11967413-11970668 | CD8_Naive_7pool | SE_22216 | chr1:11967346-11970790 | CD8_Naive_8pool | SE_34570 | chr1:11966817-11970548 | HCT-116 | SE_40308 | chr1:11967553-11971272 | K562 | SE_54351 | chr1:11967622-11970499 | Spleen | SE_66899 | chr1:11967081-11970418 | H2171 | SE_67244 | chr1:11967631-11970544 | MM1S | SE_67657 | chr1:11967812-11970390 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 11968510 | 11969143 | chr1 | 11967830 | 11968200 |
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Enhancer Sequence | ATTAAAAAAA AAAAAAAATT GCAAAAACCG CAATTACTTT TGCACCGATC TAATAGCTCG 60 CCCACTGTAA GTAAAGCAGG TAAAGTCAGC CTTTTTCTTC TGGGACCAGA CTCTGCTCTG 120 CCCCGCGGTG GTGGCCTCAG GCGCAGCGCT AAAACGCATG AACCATTTAA GGTATTTCCT 180 GAAACTGGAG CGTGATTGGT GAGACTTTAT TTGCATACCC ACAATGCATT GCGCACTAAA 240 TAATGTTCGT CTTTAAAATT ATTTCCCCTT TTTCCTTCAA CATATCTTTC TCGGAACCGA 300 GATTGCTGTC CCAGAATTGT CTGAAGAAAA AGGCTGAAGT CAATAGCTCT TTTGGGCCGA 360 AGGAAAGTTA CCATTACCCG TTTAGGAGTA GCCGTTACCT GAGAACTGTA GTGTCGACGA 420 CTGATGTTAT ACTCTGGTTT CTCTTCAAAT CGTATAAATC TTTCGCCTTT TACTAAAGAT 480 TTCCGTGGAG AGAAACGAGT GTGAGTCTGA AACCAATTTT TTGAGGCCTT GCGTTTCTTA 540 GCAGGGCTTA TTTTAAGTGT TTTAAAAACA GATGCGATTC CGTTAAATCG CGTGTGGAGC 600 TATGTAAAGT GTATTATAGA ACAAATGCGA GTTACGGTTT TTCAGCTTTT CGCTTTGTTA 660 AGGTATGTGA TATCAATTGT ATTGCATTTC TGAGCAGTTA TAATATTAAG ATGTTGGGGT 720 GGCTTACTGC TTTTGACCAA GAAGTAGGGT TTGTTGGTTG ATTACACCAG TGGTTTTTAA 780 CCCCAGCCAC TGAGTGATGG AGGGTTACCG ACTCACAAGC GAGCATTAAC GCCTGAGGTC 840 CGCCTGCTGT CAGGGCAGCA AGGCATCAGA TTCTCCTAGG AGCGGGAACC CTATTGTGAA 900 CTGCGTATAC GAGGTATCTA GGTGCGTGCT CCTTTTAAGA ATCTAATGGC TGATGACGAG 960 GGGCACAGTT TCAACCTGGA ACTGTCCACA CCCCCTACCC ACCTTCCCCC GCCCTTGGAA 1020 AAACTGCCTT CCATGAACTG GGTCCCTTGT GCCAGAAAGG TTGGGGACCG CTGGACTATC 1080 CGATCAAATG AAGCAGGGAC TCGGGGCGAG CTCCCCCGCT GCTCCCGCCG GCTTCTCCGT 1140 GTAGAATCGA AGAAGGCAGT CCCAAGGGCT CTTCTGCCCC GTATCCCCGC CTGAGGAGCG 1200 TGCCAGGCGC GCAGCTAGTC CTCCCCCGAC CCAACCGGTT TGATGAAACG CAAGAGAAAG 1260 TGAATTTTCC AGCCACTCCC ATTGGCCAGA ATTCGTCTCA GCCGCAAGGG AGGCTGGGAA 1320 GTGCAGTCAT GCCTTCAGGT AGCCGTGAGC CCTGCTAGCG ATAGGAGATT CTAGAGAGAG 1380 GTTGAGTACT GGGGAGGAAA AACTAGCAGG GTCTGTCCCA GTAAAGGAGG GAGGAAATCC 1440 ATCGCAAAAA ATCCTGACCC CCAGGCCGGG CGCGGTGGCT CACGCCTGTA ATCCCAGCAC 1500 TTTGGGAGGC CGAGGCGGGC GGATCACCTG CGGATCACCT GAGGTCAGGA GTTCGAGACT 1560
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