Tag | Content |
---|
EnhancerAtlas ID | HS145-14563 |
Organism | Homo sapiens |
Tissue/cell | NHBE |
Coordinate | chr20:30177330-30177810 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LMX1B | MA0703.2 | chr20:30177380-30177391 | TTAATTAAAAT | - | 6.62 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_33920 | chr20:30177204-30177828 | HCC1954 | SE_41187 | chr20:30174792-30177861 | Left_Ventricle | SE_44319 | chr20:30174808-30177851 | NHDF-Ad | SE_47160 | chr20:30174886-30177967 | Panc1 | SE_55719 | chr20:30176558-30177702 | u87 | SE_57184 | chr20:30177303-30177819 | VACO_400 | SE_67492 | chr20:30176558-30177702 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 30177435 | 30177766 | chr20 | 30177582 | 30177600 | chr20 | 30177600 | 30177787 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I031587 | chr20 | 30174935 | 30178277 |
|
Enhancer Sequence | CTTGTCATTG GACAAGTAAG TAGTTTTCAA TTTTTGGGTT TTTTTTTTTT TTAATTAAAA 60 TAGACATGGA GTCTCGCTAT GTTGACCTGG CTGGTCTTGA ACTCCTGGCC TTAACTGATC 120 CTCCCATCTC GGCCTCCCAA AATGCTGGGG TTACAGGCAT GAGCCACTTG CAACCGGCCT 180 AGTTTTCAAT TTGTTGTTGT TGTAGAAATG GCTGTCACAT TCTTGCCCAC ATCTGCTTTC 240 TTGTGTGCAG GCCTCCCAGG GTATGTCCGT GGGAGTGAAT CACTGGCTCA TAGGGTGTTT 300 TCAAATGTTC ACTTTTGGTG GATATTGCCA AATTGAGTTC CCAAGTGGTC ATACCAGTTT 360 ACACACCCAC CAGCACTGGA TGAGTGTTAT TTTCCCACAT GCTCACCAAC ATTTTTTTTT 420 TCTTTGAGAT GGAGTCTCGC TCTGTCGCCC AGGCTGGAGT GCAGTGGTGC GATCTCGGCT 480
|