Tag | Content |
---|
EnhancerAtlas ID | HS143-01700 |
Organism | Homo sapiens |
Tissue/cell | NGP |
Coordinate | chr2:55345650-55348680 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MEF2A | MA0052.3 | chr2:55346084-55346096 | GCTAAAAATAGA | + | 6.92 | MEF2B | MA0660.1 | chr2:55346084-55346096 | GCTAAAAATAGA | + | 6.44 | MEF2C | MA0497.1 | chr2:55346082-55346097 | CAGCTAAAAATAGAA | + | 7.03 | RREB1 | MA0073.1 | chr2:55345724-55345744 | CCCCAAAACACACTCACACA | + | 6.67 | Tcf12 | MA0521.1 | chr2:55347918-55347929 | CAGCAGCTGTT | - | 6.32 | ZNF263 | MA0528.1 | chr2:55346228-55346249 | GAAGGAGACAGAGGTGGGAGG | + | 6.02 | ZNF263 | MA0528.1 | chr2:55346913-55346934 | TCCACAACCACCTCCTCCTCC | - | 6.49 |
|
| Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
SE_00239 | chr2:55344287-55348834 | Adipose_Nuclei | SE_03190 | chr2:55345701-55348807 | Brain_Angular_Gyrus | SE_03921 | chr2:55344145-55350364 | Brain_Anterior_Caudate | SE_04845 | chr2:55344179-55352214 | Brain_Cingulate_Gyrus | SE_05873 | chr2:55343882-55350407 | Brain_Hippocampus_Middle | SE_06720 | chr2:55334097-55353338 | Brain_Hippocampus_Middle_150 | SE_07801 | chr2:55345118-55350499 | Brain_Inferior_Temporal_Lobe | SE_08941 | chr2:55347239-55347610 | Brain_Mid_Frontal_Lobe | SE_08941 | chr2:55347616-55348180 | Brain_Mid_Frontal_Lobe | SE_13769 | chr2:55345060-55348593 | CD34_Primary_RO01536 | SE_14856 | chr2:55341808-55348753 | CD4_Memory_Primary_7pool | SE_21142 | chr2:55344624-55348732 | CD8_Memory_7pool | SE_27564 | chr2:55346897-55347745 | Esophagus | SE_27564 | chr2:55347746-55348367 | Esophagus | SE_30501 | chr2:55345751-55349060 | Fetal_Muscle | SE_33603 | chr2:55345385-55348990 | H2171 | SE_37014 | chr2:55345568-55349336 | HSMMtube | SE_39897 | chr2:55341985-55348692 | K562 | SE_43033 | chr2:55346893-55348448 | Lung | SE_45296 | chr2:55347422-55348111 | NHLF | SE_46551 | chr2:55346382-55348823 | Osteoblasts | SE_49902 | chr2:55345547-55348624 | RPMI-8402 | SE_51987 | chr2:55346362-55349066 | Skeletal_Muscle_Myoblast | SE_54907 | chr2:55347105-55348575 | Stomach_Smooth_Muscle | SE_56652 | chr2:55347200-55348463 | u87 | SE_63794 | chr2:55346348-55349117 | HSMM |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr2 | 55347806 | 55348001 | chr2 | 55347552 | 55348554 | chr2 | 55346043 | 55346260 | chr2 | 55346724 | 55347194 | chr2 | 55347225 | 55347468 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I055118 | chr2 | 55345786 | 55348953 |
|
Enhancer Sequence | TATGGTCCTC TGCTTCTAGT GGACAGACTA TTGAATCTAG TTCACGATTC TTTTGTAAAA 60 CAATCCTCCC TGCCCCCCAA AACACACTCA CACACATGCA CAAACTCCCT CTCAACTTTA 120 TCAATTATCT GTGTCAAGTT GAATCTTCAC CAAACCAGGA GTTAAGTCTA GTGGATTCTG 180 AAGCCATGCA ACCAGCCATC AGTGCAGAGG GAAAAGGACA GAAAGGCCCT AGCTCATGGA 240 ACCCTGAAAA GAGACTGCTC TCTAATGCAG ATGAGGACGC AACCGTTCTG TTCCCTGCTG 300 TTCTGATTGC TATCAGGCTT CAACCATCAG ATATGGGTCC CTGACAATTT ATCAGGAAGC 360 AAGCAGCCTG CCTTTTCTCC TGTCTAAATT CTGCATTCTA TTTCCTTGTA TTCTACACAA 420 AATGCAAAAC AGCAGCTAAA AATAGAAGCT GAGGTGCTAG TGAGGCTGAT TTGTGTGTGA 480 AGAAGGCAGA GAGATATCGG GGGAAGAATT CAGAGGAGAG CTGCCTGGGG CCCCTTCCTG 540 AGCTGTCACA GACAGCAGCC TGGAAAAGAA ATACAAGGGA AGGAGACAGA GGTGGGAGGC 600 TGGATGGACT GCCCAATTAT TACACCTGCA GAGAATCCTT GCGGGTTTTT TGGGCTCCCT 660 AAAAGCGCCC TGACCTATTT TTTGAAACGT TTTTTTCCTT ATTCGTCAAA ATACATTCTC 720 AGTGAATTGC AGTCAAGTTT CCTGCAATTA CTCAATCTAA AGTTTTGTTT TCTACACTGG 780 GAGCTATAGT CTATGCCTCT ACGTATAATG GTAATATACT CAACAGTACC AGGCTGACGA 840 TGGATAGGGT GAATTTCTTA AAGTGGCAGG GAAGCTGCAG TTTTAAATGA ATCCACCTGA 900 AAAGCTTTGA ACAAAGCCTT GAGTCTATTT AAGAACAGAG AGCTCGTGTG ATAGCTGGCT 960 GGCTTCATCC CTTAGATAGG GGACACAGAC TTATTGGATG CAAGTATAAA AGCCTTATAG 1020 TAGAAGTAAA TTTCATAATG CCTTGGATTT ATAGAGCACT TTTCTTCATA GAACTTGTAT 1080 TCTCTGGGCA GAGTGACCAG CCCAACTTGG AATCTCGCTT AGCCATAGTG AAAATGATGA 1140 AAGTATTACA GGGGGCAAAA AAGCAAAAGA TCAGGGAGAG AAGTCAATAG TTCCCCAGGG 1200 ATCTCCCAGG GCAACCTTGC TCCCAGACTG CTGGAGCACC ACTAGGATCT AGGGCATGTG 1260 GTTTCCACAA CCACCTCCTC CTCCCTCATG TCATAGGGCT GTTGAGAAAA CGGGATTAGC 1320 TACATGGCCA ACCCATAATT ATGCAGGGGT GGAGGAGTCA GACCATTGAC CAGCTGGCTT 1380 CTCATTTCTC CTTCTCTCAG CTGCTCACCA GCCTCAGATG CAGGAGGGTG AAGATGGGAT 1440 TCCCAGAACA CCTCTCCATT TGCTCCCATG AACTGGAAAA AAGCGCAGTC ATTGCAAGTG 1500 ACTGTAAAAT GCAAACCCAT GCCTCGCTGT GGGCTGCGTG AGGCCCAGAC TGGCCCACGG 1560 CACTGAGAGG TGGGGTGGGT GAATGATTCC CATGCCCACT CTGGACACCC AGGCCTTGCC 1620 TTGGCAGAAC CTAAGGAGGG GCTGAACAGC ACAGCCGCAT CTCTGAAGAA AGCAACCCTG 1680 TGTCACCCCA GGCAGATGCT GAGGCCGAAG GAAGCAAAGG TTCTTAGAAG GAAAGCAATG 1740 CTTCCTGCCC CCCTCACTTT AGCTCTCCGA AGCCACTTTT CCCAGCAGGT TTCCCCCTAT 1800 CTCCAGCTCA CCAGGGTGGG CACAGACAGA AGGAAACTCC TGGCTGGGCA CCCTGGCAGG 1860 CTCAGGGAAA CTAGAGCCCA GGCTTGGGCC CTGCCTTGCC AACCTTCCTC CGGCCCAGGC 1920 TTTACAACGG GCCCTTCCTC CAAGCTGGGG CTGGCCCCCA AACCTCTCAC TGTCCCTCCA 1980 TTCTGCTTGT CCCCTTTCAA CTGCTCAGCA GTCAGAAGAC GAGCAGGAGA TCTTTAACAA 2040 CTTGAACCTG ACCAAATTAA GTTTGAGATG GTTTAAATAA ATGTCCAAAT GAGTTTTCTA 2100 CATTTCTATG CTTTCTCTAA CTCCCATTCT CAAGCAAGTG AAAAAATGTC TCTGAGTGAA 2160 GCCCTCAAGC TCTGACTGAG AATATAATGT TGTTATTATT AGAGCAACGG GGAAGGAGAC 2220 ATGCCATCTC CAGGCAGGGC TCGGGCGGGC TGTGTGGGAG GCGACTGTCA GCAGCTGTTG 2280 GGTGGAAAGC TTATTTATTG TCAGCAGCCT GGCTCAGAGA TTAAGAAAAG CTCGGGTCTC 2340 CGGCTTACAC ACACATAGCT GCAGGCAGCA GCTGCTCCAG ACATGGCATT CAACCACAGG 2400 GGTCCCCAGG GTCTCCTTTC AGGGTTAACT TGACCAATAA GGAAACCCTG GTGGCCACCA 2460 GGACAGCTGG AAAAATTCCC ATGGGGCCAC AGAACCAAAT ACCCCCAATA AAAATGTTCA 2520 GCATCCAATG CCTTCGCCAG ACTAAACCCA AGAACCCAGA ATCAGCCTTG AATCCCACAC 2580 AACAGCAACA GCTCTATGTC CTGAGACTGT TTTCCAGTCA TTCACCAAAT ACTTATTGTG 2640 CAGTGTCTGA CAGACACCAT ACATGGGACT GGAAATAGAC CAATGAATGA GACAGTCAGT 2700 CCCGATCCCT GCTCTCAGGG AGCTCACAGT CTGGTAAAAA TTACCTGCAG TTAAACTGGT 2760 AAAAAATCTT GTGTTGAGTA TTATGATAGA GGAAGCTCAG GGAGCTATGA GTACAACATC 2820 AGGAAAAATC TAACTGACCA CAAGGAATTG CCCTGGTAAG AAAACCATCA CTAAGAGATA 2880 CTGTGAAGTT TGGGATTAGG GTCTCAAGAG ACGTCAGCCC AAGACCATTA CCACTATTTC 2940 TCCTTCTTCA GCTAATTAAA CTTTTAGCTA ATATCTACCC ATTTGATTCA TGTTCTGTTT 3000 ATTACCAGTC TGTTGAACAG AAGGCTCTGG 3030
|