EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS141-09557

Organism

Homo sapiens

Tissue/cell

NB4

Coordinate

chr19:47122780-47123720

Target genes

Number: 20
Name	Ensembl ID

PPP5C	ENSG00000011485
AC011551.1	ENSG00000249210
AC011551.2	ENSG00000230510
CALM3	ENSG00000160014
PTGIR	ENSG00000160013
DACT3	ENSG00000197380
PRKD2	ENSG00000105287
Y	ENSG00000222614
FKRP	ENSG00000181027
STRN4	ENSG00000090372
SLC1A5	ENSG00000105281
AP2S1	ENSG00000042753
ARHGAP35	ENSG00000160007
snoU13	ENSG00000252071
NPAS1	ENSG00000130751
TMEM160	ENSG00000130748
ZC3H4	ENSG00000130749
SAE1	ENSG00000142230
CCDC9	ENSG00000105321
PRR24	ENSG00000257704

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr19:47122856-47122874	GAAAGGAAAGAAAGAAAG	+	6.03
EWSR1-FLI1	MA0149.1	chr19:47122852-47122870	GAAAGAAAGGAAAGAAAG	+	6.33
RREB1	MA0073.1	chr19:47123111-47123131	GCAGTGGGGCTGGGTGGGGG	-	6.05

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_02059	chr19:47122887-47130350	Aorta
SE_16239	chr19:47121829-47123428	CD4_Naive_Primary_7pool

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2
Chromosome	Start	End

chr19	47122898	47123355
chr19	47122937	47123471

Enhancer Sequence

AGAAAGAAAG AAAGAAAGAA AGAAAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG 60
AAAGAAAGAA AAGAAAGAAA GGAAAGAAAG AAAGAAAGAA AGAAAGAAAG AAAGAAAGAA 120
AGAAAGAAAG AAAAGAAAGA AAGAAAGAAA GAGGATTTAT AATAGGTTGC CCTGTGGATG 180
GAGTGGGAGG AAGCGCTGCC TACCCCTCGA AGAGTTGGCT GCTGTTGTCC TCATGGGAGG 240
CTCAGGCCTC ACGTACCGCG CCTCTCCCCA AGTGTGGATT TTTTGTTTTA ACAGAGGGGG 300
AGAGTAGGAA AGGGGAACTG GGACTGGCAG TGCAGTGGGG CTGGGTGGGG GGAGTTCCCA 360
CTCACCCTCC CCCACCCTAA ACGCCTACTC ACTTCCTTCC ATGCTCATCA GCTCACTCCT 420
GAGCACCCTC CATCCTGGGC CTCTCTGAGG GCAGGGAGTG GTCATGAGAA GCCTGTGTGG 480
ATGGCAGGCT GGAAATCACC CCGGCAGGGC CCAGGGTGGA GCAGGGGCTT GTCTGTGTCC 540
TTAACACCAG GCAATCAGCA CTGCTGAATT TCAGTGGAAG GTTGAGGGTT TTTTTGGGTT 600
TTGTTTTTGA GACAGTGTCA CTCCGTCACC CAGTGGCACG ATCTCAGCTC ACTGCAGCCT 660
CAACCTCCCA CGTTCAGGTG ATCCTCTTGT CTCAGCCTTC CTAGGAGCTG GGACTACAGG 720
TGTGCACCAC CACGCCCAGC TAATTTTTAA AATTTTTTTG TAGAGACAAG TTCTCGATAT 780
ATTGCCCGAG CTGGTCTCAA ACTCCTGGGC TCAAGGGATC CTCCCACCTG AACCTCCCAA 840
AGTGCTGGGA TTACAGGCAT GTGCTATGGT GCCCAGCCAA GTATCTGTTG AATGAATGAA 900
TGAATGAAAT CTTGGTGAGG GCTCTAAGGA CACATAACAT 940