EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS141-01137

Organism

Homo sapiens

Tissue/cell

NB4

Coordinate

chr1:149678430-149680360

Target genes

Number: 27
Name	Ensembl ID

RP11	ENSG00000223779
U1	ENSG00000252105
FCGR1C	ENSG00000253193
RP5	ENSG00000237503
HIST2H3PS2	ENSG00000203818
FAM72C	ENSG00000203817
PPIAL4C	ENSG00000198161
HIST2H2BF	ENSG00000203814
HIST2H3D	ENSG00000183598
HIST2H4A	ENSG00000183941
HIST2H3C	ENSG00000203811
HIST2H2AA3	ENSG00000183558
HIST2H2BC	ENSG00000220323
HIST2H2BD	ENSG00000203819
HIST2H2AA4	ENSG00000203812
HIST2H3A	ENSG00000203852
HIST2H4B	ENSG00000182217
HIST2H2BE	ENSG00000184678
BOLA1	ENSG00000178096
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SV2A	ENSG00000159164
SF3B4	ENSG00000143368
MTMR11	ENSG00000014914
OTUD7B	ENSG00000163113
VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr1:149679437-149679452	TGAACTCTTGACCTC	-	7.64
RARA	MA0729.1	chr1:149679434-149679452	TCTTGAACTCTTGACCTC	-	6.45

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I121015	chr1	149678963	149680437
GH01I145160	chr1	149679185	149680660

Enhancer Sequence

TCAAAAATAA TAGTAATAGT AATAATTTAC TGTTCTCATA AAAATTAGCG GATGGGGAAT 60
GGAGGCAAGC CAGTGTAGAC CATGACAACT AGTTTAGATT TTATTGTAAA CTCATTAAAA 120
GCTCGTTCTC GTTTTGTGTT TTTAAAAAAT CCCACTGATA CAGCCGTTTT CTCTACCAGA 180
TGAGACTATA ACCGTATTAT TTCATCAGTG GAAGCTACAG ACAAAGGGCC CTTGAGAGGC 240
GGCATCTTCA CCTATGGGAA TTTTTTCTGC TCCATTGTGA GACAAAGAGC ATGTCCGAGT 300
TTTCATTTTG GCCAGGCCGC CCCCTAGTTT ACGCACTGTG GACTAAACTC CAGAAGCTGG 360
CGCCCTTCCG GGCCAGCGGT TTACTCCGCT CTCTGGAGGC TGCTAGGATT AAAGGCAAAG 420
CAAACGACAG GTCTTTTAGC TACAATCGCA GGAGAGAAAA CACTACTGTG ACTCAGATTA 480
GAACCCAGGT TGCGGCAACC ACAGCTACAA GTATTGACCA CTACACGACC AAAAAGCCTG 540
CTGACAACCA TTGTACTTCT TATATTTTTT TATGTAAAAA CACTCATACT ATTTTCTCTG 600
CTTTATTCTC GAACGTCTGC AGATTTTCGT GCTTTTCTCT CTTTCATGCG CTTCTCCGTT 660
ACTCTCTCCC CATTCCGCTA CATAATTTAA AAAACATCTC ATCTCTCAGG ACCTGGCCAC 720
TGCCTCTACA ACAAGCCTCC TGGGAAGTCT CGTTGTCCCA TCGACACCTC TCCCTTCTTT 780
CGCTCCATTT TTTTTTTTTT TTTTTTTTTT GACGGAGTTG CTCTGTCGCC CAGGCTGGAG 840
TGCAGTAGCG CGATCTTGGC TCACTGCAAC CTCCGCCTCC CGGGTTCAAG CGATTCTCCT 900
GCCTCAGCCT CTCAAGTAGC TGGAATAGCA GGTGCACGCC ACCACATTCG GCTGATTTTT 960
GTATTTTTAG TAGAGACGGG ATTTCACCAT GTTAGCCAGG CTGGTCTTGA ACTCTTGACC 1020
TCAAGCGATC CATCCGCCTC GGCCTCACAA AGTGCTGGGA TTACAGGCGT GAGCCACCGT 1080
GCCTGGCCAA ATTTCAGGCC AACACCTGTT GACACACATT GCCAGACACA CGGAATCCCT 1140
CACTGAACAC CGATGGGCCC ACAAAACACG CGGAGGCCAC GGTGGCTGAA GATGTTAGCA 1200
AATTCGGTTC GCGGTGTCTG GGGTACAGCC TCGAGGGTCC ATTGGCTACC TCTGTGCAAG 1260
GACCACTCTG CGCAAGGACC AGTCACCGCT GCTCTCCTCA TCTCCATTGA GATTCTCCCG 1320
CACACACCTC CCCTTTCTTT GGGCCGCTGA GGCCTCTTGG ACCTCCGAGG TGATTGCCCC 1380
GCCCGCAGCT TCTCTCCCTC CGGGAGCTTC ATTTCTTGTT CCTCTCCGTA GTGGCTCAGC 1440
GGTAAGCCCA AGGTCCAGCA CACGAATCAG GAAACTGATG GTTCTTGGGT TAGCAGGAAT 1500
CCGCCCAGAG AACAGATGAA AGTAACAGGT ACCAATATCA AAACTGCAGT GACTCACCAG 1560
AAACACTACG TGCTTGCCAC TTTGCTTAGC GGTTTGTTGA GTCCAACAAC TGCGTGGGTC 1620
CCGGGTTAGT CTCCTGAATA TCTTTTGCTG CTACTTTGGT CAGCGTTGTT GTCAGTTTAC 1680
CTTGTGGTGG CCAAGCCCTT AAATGCACTA TTAGGTTATG CAGTGTAATT CTGCAGGGCA 1740
GAAGGGTAAA GAGCCATAGT GAAGAGCAAA AATACCTCTT ATCTTGACCG GGAATTAAAC 1800
CCGGGTCTCC CGCGTGGGAG GCGAGAATTC TACCACTGAA CCACCAGTGC CTCTCTCTAG 1860
CAACCCTGGG AGAATTATCA AAAAGAGTAT CCAGAAAGAC TTAGAAACTT CCAAGCGGCC 1920
TTTTCAAGTG 1930