EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS141-00374

Organism

Homo sapiens

Tissue/cell

NB4

Coordinate

chr1:28903590-28904010

Target genes

Number: 27
Name	Ensembl ID

EYA3	ENSG00000158161
RP5	ENSG00000228589
RNU7	ENSG00000252429
PTAFR	ENSG00000169403
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
RP1	ENSG00000229820
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
snoU13	ENSG00000238821
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNORD99	ENSG00000221539
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
RP11	ENSG00000229388
RNU11	ENSG00000209804
GMEB1	ENSG00000162419

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1

MA0499.1

chr1:28903963-28903976

TGCAGCTGTCCCT

7.82

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I028577	chr1	28903621	28903750
GH01I028579	chr1	28903901	28904170

Enhancer Sequence

CACACACATA CATACATACA GGACTTGGCC TTTCAGCTCC TATATTTGAC TGAAGTTCTT 60
CCACTATGCA CTTATTGTCA GTTCTTGAGA TGATGCTCTG GACTTAATAA CTTTGATCAG 120
ACCTTCTAAA CCCAAATTTG AAGTGAGGAC CAGACCAGAA AATCTAGGAT ACATGATGGC 180
TAGAGACACA GGTGTAGCTT TTAATAGATG CAGGCTAACA GCTGCCATTT TCCCATTCTC 240
TAGATACATT ATTCTATTTT CATCTTCCCC AGAACCCTGC AAGGCAGTGC TTTCACTTCC 300
TGAAAGAAAC TGGCAGGATA GGGACCTTAC CATAGAACAG AGTTCTGGGA GAAGGGAACT 360
GAACCAGGTC CCTTGCAGCT GTCCCTAGAC TTCCCTGACC CCATCCTTGC TTGCTTTCCA 420